RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SERPING1P05155 500 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 HOXC4P09017 264 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-202ENST00000517403 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 PIRTP0C851 137 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 CTSEP14091 401 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 GLB1P16278 677 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ADCY8P40145 1251 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 INHBCP55103 352 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 TMPRSS3P57727 454 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 GRM3Q14832 879 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 PYCR3Q53H96 274 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ANKRD20A8PQ5CZ79 823 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 RAET1GQ6H3X3 334 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ALKBH5Q6P6C2 394 aaKnown RBP8.6□□□□□ -1.03
PABPC1-202ENST00000517403 LVRNQ6Q4G3 990 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 XKR5Q6UX68 686 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 USP53Q70EK8 1073 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 GKN2Q86XP6 184 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ARL14Q8N4G2 192 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 WDR36Q8NI36 951 aaKnown RBP8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ZNF564Q8TBZ8 553 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-202ENST00000517403 NAT14Q8WUY8 206 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 SCRN2Q96FV2 425 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 COX14Q96I36 57 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 GORASP1Q9BQQ3 440 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 RIOK2Q9BVS4 552 aaKnown RBP8.6□□□□□ -1.03
PABPC1-202ENST00000517403 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 SPTLC3Q9NUV7 552 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 MOSPD1Q9UJG1 213 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 ACSL6Q9UKU0 697 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 SPO11Q9Y5K1 396 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 AHCTF1Q8WYP5 2266 aa8.6□□□□□ -1.03
PABPC1-202ENST00000517403 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 PRR19A6NJB7 356 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 CACNB4O00305 520 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 AURKAO14965 403 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SNPHO15079 494 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 PROSCO94903 275 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SERPINC1P01008 464 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 IVLP07476 585 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 MYBL1P10243 752 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 FGF3P11487 239 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 PECAM1P16284 738 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 ITGB6P18564 788 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 HNRNPH3P31942 346 aaKnown RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 ARL4AP40617 200 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 ZBED6P86452 979 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 GALNT3Q14435 633 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 PIGHQ14442 188 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 CLCA4Q14CN2 919 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 LLGL1Q15334 1064 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 AMZ1Q400G9 498 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 HS1BP3Q53T59 392 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 HENMT1Q5T8I9 393 aaKnown RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 ARMC12Q5T9G4 340 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 LYSMD3Q7Z3D4 306 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 FBXO39Q8N4B4 442 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 BMPERQ8N8U9 685 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 LPCAT1Q8NF37 534 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SLC37A2Q8TED4 501 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 ZDHHC1Q8WTX9 485 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SYN2Q92777 582 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 USP7Q93009 1102 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 TADA1Q96BN2 335 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 OLFM3Q96PB7 478 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 DPEP2Q9H4A9 486 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 OCIAD1Q9NX40 245 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 OGFRQ9NZT2 677 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 SAE1Q9UBE0 346 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 TBC1D29Q9UFV1 150 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
PABPC1-202ENST00000517403 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
PABPC1-202ENST00000517403 COL6A6A6NMZ7 2263 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 IGHV1OR21-1A0A087WYE8 117 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-202ENST00000517403 GOLGA6CA6NDK9 693 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 SMTNL1A8MU46 457 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 F5H423 210 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-202ENST00000517403 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 NUDT21O43809 227 aaKnown RBP8.58□□□□□ -1.04
PABPC1-202ENST00000517403 MTX2O75431 263 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 GOLGA6DP0CG33 693 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 HTR1BP28222 390 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 ACTR1BP42025 376 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 RPIAP49247 311 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 BLKP51451 505 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 UBASH3AP57075 661 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 ACTR1AP61163 376 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 DPTQ07507 201 aa8.58□□□□□ -1.04
PABPC1-202ENST00000517403 CCDC122Q5T0U0 273 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms