RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 MFSD7Q6UXD7 560 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CRELD2Q6UXH1 353 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC39A5Q6ZMH5 540 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PPP1R21Q6ZMI0 780 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GLDNQ6ZMI3 551 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF813Q6ZN06 617 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GBP6Q6ZN66 633 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RBPMS2Q6ZRY4 209 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 COLCA1Q6ZS62 124 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RBM43Q6ZSC3 357 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PIK3AP1Q6ZUJ8 805 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C11orf57Q6ZUT1 292 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PTCHD4Q6ZW05 846 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF365Q70YC5 407 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAS2R42Q7RTR8 314 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PLPPR4Q7Z2D5 763 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARMC9Q7Z3E5 817 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC46A3Q7Z3Q1 461 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 KRT27Q7Z3Y8 459 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPATA21Q7Z572 469 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C1QL2Q7Z5L3 287 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPATA19Q7Z5L4 167 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PPP1R32Q7Z5V6 425 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAMKMTQ7Z624 323 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 YTHDF3Q7Z739 585 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DSG4Q86SJ6 1040 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TADA2BQ86TJ2 420 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 DTX2Q86UW9 622 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM160B2Q86V87 743 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 KBTBD6Q86V97 674 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IGFN1Q86VF2 1251 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GLCCI1Q86VQ1 547 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IQCHQ86VS3 1027 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 HOOK3Q86VS8 718 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 XYLT1Q86Y38 959 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PALB2Q86YC2 1186 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RASAL3Q86YV0 1011 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RFX6Q8HWS3 928 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAMK1DQ8IU85 385 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 LINC00346Q8IVM7 164 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 MFN1Q8IWA4 741 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CNTN4Q8IWV2 1026 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 KLHL7Q8IXQ5 586 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC13Q8IYE1 715 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PM20D2Q8IYS1 436 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 HACE1Q8IYU2 909 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SCYL3Q8IZE3 742 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TBC1D3Q8IZP1 549 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SYCP3Q8IZU3 236 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CLYBLQ8N0X4 340 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR4N4Q8N0Y3 316 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 LYG1Q8N1E2 194 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXL14Q8N1E6 418 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 KDM8Q8N371 416 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXW8Q8N3Y1 598 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GALNT16Q8N428 558 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GUF1Q8N442 669 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IQCF1Q8N6M8 205 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARFGAP1Q8N6T3 406 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PI4KAP1Q8N8J0 262 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ENDOVQ8N8Q3 282 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM133AQ8N9E0 248 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TC2NQ8N9U0 490 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IQUBQ8NA54 791 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 PNLDC1Q8NA58 520 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM47BQ8NA70 645 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 IL17RCQ8NAC3 791 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZBTB8BQ8NAP8 495 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NHLRC2Q8NBF2 726 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 XXYLT1Q8NBI6 393 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAMKVQ8NCB2 501 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM116Q8NCL8 245 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 KCNH5Q8NCM2 988 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADPRHL1Q8NDY3 354 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SRFBP1Q8NEF9 429 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 LPCAT1Q8NF37 534 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC148Q8NFR7 591 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR7G3Q8NG95 312 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR6J1Q8NGC5 347 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR56B2PQ8NGI1 322 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RASSF8Q8NHQ8 419 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C16orf52Q8NHV5 167 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 C9orf43Q8TAL5 461 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SUN3Q8TAQ9 357 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 OSR1Q8TAX0 266 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 GRAPLQ8TC17 118 aaPredicted RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 URGCPQ8TCY9 931 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 BPIFB1Q8TDL5 484 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD49Q8WVL7 239 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TEKT4Q8WW24 435 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 XAGE5Q8WWM1 108 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC13A3Q8WWT9 602 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC5A11Q8WWX8 675 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATL1Q8WXF7 558 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAB40AQ8WXH6 277 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 SEPT1Q8WYJ6 367 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAPGEF4Q8WZA2 1011 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 TFAP2BQ92481 460 aa0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 MRPS27Q92552 414 aaKnown RBP0.59□□□□□ -2.31
RNU4-54P-201ENST00000516428 NR4A3Q92570 626 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms