RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	HSD11B1L	Q7Z5J1	315 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	TMC3	Q7Z5M5	1100 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	TECPR1	Q7Z6L1	1165 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	PCGF5	Q86SE9	256 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	HEATR4	Q86WZ0	1026 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	PHYKPL	Q8IUZ5	450 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	HID1	Q8IV36	788 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	PHACTR4	Q8IZ21	702 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRAM1L1	Q8N609	369 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	AVL9	Q8NBF6	648 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	MNS1	Q8NEH6	495 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	OR6C4	Q8NGE1	309 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	GABPB2	Q8TAK5	448 aa	Predicted RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	GDAP1	Q8TB36	358 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	DTX3L	Q8TDB6	740 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	ATG4A	Q8WYN0	398 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	MRGPRX2	Q96LB1	330 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRIB3	Q96RU7	358 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	PAIP2	Q9BPZ3	127 aa	Known RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	GSDMC	Q9BYG8	508 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	ABCG8	Q9H221	673 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	ARNT2	Q9HBZ2	717 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	EIF2B3	Q9NR50	452 aa	Known RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	RAB6B	Q9NRW1	208 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	NLGN3	Q9NZ94	848 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	BFAR	Q9NZS9	450 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	VPS18	Q9P253	973 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	APOBEC3B	Q9UH17	382 aa	Known RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	SHOC2	Q9UQ13	582 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	CA5B	Q9Y2D0	317 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	R3HDM2	Q9Y2K5	976 aa	Known RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	DGKB	Q9Y6T7	804 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	CEP295	Q9C0D2	2601 aa		7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.44	□□□□□ -1.22
NR1I3-231	ENST00000512340	KNTC1	P50748	2209 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TCRBV7S2A1N4T	A0A589	114 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	HEATR9	A2RTY3	570 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	GOLGA8CP	A6NN73	597 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CFAP99	D6REC4	459 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340		F5H423	210 aa	Predicted RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SCAMP1	O15126	338 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	VEGFD	O43915	354 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SH3BP5	O60239	455 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PHF2	O75151	1096 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PIAS2	O75928	621 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SLC25A14	O95258	325 aa	Predicted RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	AGT	P01019	485 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	APRT	P07741	180 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	C1S	P09871	688 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	ITGAL	P20701	1170 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	LHCGR	P22888	699 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	DGKA	P23743	735 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SPAM1	P38567	509 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	ETF1	P62495	437 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CDK3	Q00526	305 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	E2F1	Q01094	437 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CKAP4	Q07065	602 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	ILK	Q13418	452 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TUBB2A	Q13885	445 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	LRP8	Q14114	963 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SEPT6	Q14141	434 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	FZD2	Q14332	565 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRIP6	Q15654	476 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PRRT3	Q5FWE3	981 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	LDLRAP1	Q5SW96	308 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PAPD7	Q5XG87	772 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CCDC137	Q6PK04	289 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	LAYN	Q6UX15	382 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	RANBP10	Q6VN20	620 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	RD3	Q7Z3Z2	195 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TSPAN33	Q86UF1	283 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SPATS2	Q86XZ4	545 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	GALNT13	Q8IUC8	556 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CBARP	Q8N350	705 aa	Predicted RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PDCD7	Q8N8D1	485 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PPHLN1	Q8NEY8	458 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	LMX1A	Q8TE12	382 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SAP25	Q8TEE9	199 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	ULK4	Q96C45	1275 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	DCUN1D1	Q96GG9	259 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	OXNAD1	Q96HP4	312 aa	Predicted RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	ZNF514	Q96K75	400 aa	Predicted RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	HERPUD2	Q9BSE4	406 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TUBB2B	Q9BVA1	445 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	RIOK2	Q9BVS4	552 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	AP1M1	Q9BXS5	423 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	TEX101	Q9BY14	249 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	STN1	Q9H668	368 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	C10orf88	Q9H8K7	445 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	VPS37B	Q9H9H4	285 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	FSCN3	Q9NQT6	498 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	MBNL1	Q9NR56	388 aa	Known RBP	7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	CD84	Q9UIB8	345 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PYCARD	Q9ULZ3	195 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	OR1A2	Q9Y585	309 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	SLC30A1	Q9Y6M5	507 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	PKD1L2	Q7Z442	2459 aa		7.43	□□□□□ -1.22
NR1I3-231	ENST00000512340	DOCK9	Q9BZ29	2069 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms