RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	INPP5A	Q14642	412 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ELF2	Q15723	593 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ATP13A5	Q4VNC0	1218 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	LYSMD4	Q5XG99	296 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	KCTD16	Q68DU8	428 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PSAPL1	Q6NUJ1	521 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PNCK	Q6P2M8	343 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	UNC5A	Q6ZN44	842 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	CAPN12	Q6ZSI9	719 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ZNF765	Q7L2R6	523 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	NRSN1	Q8IZ57	195 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PTCD2	Q8WV60	388 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	FOXJ1	Q92949	421 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	CFAP36	Q96G28	342 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	LGR4	Q9BXB1	951 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PARD6B	Q9BYG5	372 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	MIR1-1HG	Q9H1L0	117 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	FAM96A	Q9H5X1	160 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	UGT1A7	Q9HAW7	530 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	UGT1A10	Q9HAW8	530 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	UGT1A8	Q9HAW9	530 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ARFGAP3	Q9NP61	516 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	SAMD15	Q9P1V8	674 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	RIMKLB	Q9ULI2	386 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	CNOT6	Q9ULM6	557 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	OR1A2	Q9Y585	309 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	RPS6KL1	Q9Y6S9	549 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PCDH15	Q96QU1	1955 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	DNAH14	Q0VDD8	3507 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	GLYATL1P3	A0A0U1RQE8	302 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197		A0A1W2PR77	199 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	SRP72	O76094	671 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	USP1	O94782	785 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PRAMEF1	O95521	474 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	GOT2	P00505	430 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PGAM1	P18669	254 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	MC4R	P32245	332 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	FOXN2	P32314	431 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	GPX6	P59796	221 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PDE1B	Q01064	536 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	CRYM	Q14894	314 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	KHDC1	Q4VXA5	237 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	SPDYC	Q5MJ68	293 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ZNF648	Q5T619	568 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	STEAP4	Q687X5	459 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	RAET1G	Q6H3X3	334 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	TRMT10B	Q6PF06	316 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	TRIM74	Q86UV6	250 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	RAVER1	Q8IY67	606 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PIANP	Q8IYJ0	282 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	RGL4	Q8IZJ4	473 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	SLC22A18AS	Q8N1D0	253 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	DENND6B	Q8NEG7	585 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	NAT14	Q8WUY8	206 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	LRRC39	Q96DD0	335 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	SPATA16	Q9BXB7	569 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	FAM129A	Q9BZQ8	928 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PHACTR1	Q9C0D0	580 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	TM9SF3	Q9HD45	589 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	DMTF1	Q9Y222	760 aa		13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-218	ENST00000496197	PI4KA	P42356	2102 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	RALGAPA1	Q6GYQ0	2036 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	RGSL1	A5PLK6	1076 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	PRAMEF26	H0Y7S4	382 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	INPP4B	O15327	924 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	EIF3H	O15372	352 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	PIAS1	O75925	651 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	VAPB	O95292	243 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	SSTR1	P30872	391 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	AKT2	P31751	481 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	TRIM23	P36406	574 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	HADHA	P40939	763 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	MAGEA4	P43358	317 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	PFN3	P60673	137 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	SKIDA1	Q1XH10	827 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	WDR93	Q6P2C0	686 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	ABI3BP	Q7Z7G0	1075 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	LDB1	Q86U70	411 aa	Predicted RBP	13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	C11orf74	Q86VG3	221 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	HEATR4	Q86WZ0	1026 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	TRAM1L1	Q8N609	369 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	SUMF1	Q8NBK3	374 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	OR13H1	Q8NG92	308 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	PEX13	Q92968	403 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	C19orf43	Q9BQ61	176 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	TXLNGY	Q9BZA5	131 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	FOXP3	Q9BZS1	431 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	LRRC4C	Q9HCJ2	640 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	SLC17A6	Q9P2U8	582 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	MTRF1L	Q9UGC7	380 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	RAPGEFL1	Q9UHV5	662 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	PILRB	Q9UKJ0	227 aa		13.41	□□□□□ -0.26
PTPN7-218	ENST00000496197	OAS3	Q9Y6K5	1087 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms