RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CA9Q16790 459 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 CT47A1Q5JQC4 288 aaPredicted RBP17.55■□□□□ 0.4
NUP50-218ENST00000493456 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 CCDC13Q8IYE1 715 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 BBS5Q8N3I7 341 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 NCSTNQ92542 709 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 AP2M1Q96CW1 435 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 KCTD15Q96SI1 283 aaPredicted RBP17.55■□□□□ 0.4
NUP50-218ENST00000493456 MGME1Q9BQP7 344 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 SNRNP25Q9BV90 132 aaKnown RBP17.55■□□□□ 0.4
NUP50-218ENST00000493456 TMEM98Q9Y2Y6 226 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 RPS6KL1Q9Y6S9 549 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 TTC24A2A3L6 582 aaPredicted RBP17.54■□□□□ 0.4
NUP50-218ENST00000493456 PGLSO95336 258 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 SLC2A4P14672 509 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 PSMA2P25787 234 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 HCAR3P49019 387 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 TRAF2Q12933 501 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 ARMC12Q5T9G4 340 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 ATP1A1-AS1Q5TC04 95 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 ZNF765Q7L2R6 523 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 TSPAN33Q86UF1 283 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 NLRP8Q86W28 1048 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 PSTKQ8IV42 348 aaKnown RBP17.54■□□□□ 0.4
NUP50-218ENST00000493456 MCOLN2Q8IZK6 566 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.54■□□□□ 0.4
NUP50-218ENST00000493456 NOD2Q9HC29 1040 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 PRDM8Q9NQV8 689 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 PPIL1Q9Y3C6 166 aa17.54■□□□□ 0.4
NUP50-218ENST00000493456 PRRC2CQ9Y520 2896 aaKnown RBP17.54■□□□□ 0.4
NUP50-218ENST00000493456 TRBV23OR9-2A0A075B6M9 112 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 KRT7P08729 469 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 ANKRD34CP0C6C1 535 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 MLLT10P55197 1068 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 NFATC2Q13469 925 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 PPP6R3Q5H9R7 873 aaPredicted RBP17.53■□□□□ 0.4
NUP50-218ENST00000493456 PPP1R2P3Q6NXS1 205 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 MARK2Q7KZI7 788 aaKnown RBP17.53■□□□□ 0.4
NUP50-218ENST00000493456 SLC9B2Q86UD5 537 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 NDUFAF2Q8N183 169 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 AVL9Q8NBF6 648 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 COX14Q96I36 57 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 AGPAT1Q99943 283 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 HERPUD2Q9BSE4 406 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 ULBP3Q9BZM4 244 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 ABCG8Q9H221 673 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 ZWILCHQ9H900 591 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 SIDT1Q9NXL6 827 aaKnown RBP17.53■□□□□ 0.4
NUP50-218ENST00000493456 PLEKHB1Q9UF11 243 aaPredicted RBP17.53■□□□□ 0.4
NUP50-218ENST00000493456 CD84Q9UIB8 345 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 POLHQ9Y253 713 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
NUP50-218ENST00000493456 MRPS18BQ9Y676 258 aaKnown RBP17.53■□□□□ 0.4
NUP50-218ENST00000493456 MN1Q10571 1320 aaPredicted RBP17.52■□□□□ 0.4
NUP50-218ENST00000493456 PRPSAP2O60256 369 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 VPS4BO75351 444 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 RFPL1O75677 317 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 EML2O95834 649 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PEX11BO96011 259 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 ZNF30P17039 623 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 NR1D1P20393 614 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 DPYSQ14117 519 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 LRRC66Q68CR7 880 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 ACAD10Q6JQN1 1059 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 IYDQ6PHW0 289 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 ASB18Q6ZVZ8 466 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 TRIM74Q86UV6 250 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PLXDC1Q8IUK5 500 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PGBD5Q8N414 524 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 EXD1Q8NHP7 514 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 FNIP1Q8TF40 1166 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PEBP4Q96S96 227 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 CLSTN2Q9H4D0 955 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PARVAQ9NVD7 372 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 VPS18Q9P253 973 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 PCSK1NQ9UHG2 260 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 VPS4AQ9UN37 437 aa17.52■□□□□ 0.4
NUP50-218ENST00000493456 KIR2DS5A0A0G2JLQ3 304 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 A0A0G2JNG1 304 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 KIR2DS3K7RE56 304 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 RNF8O76064 485 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 AGFG2O95081 481 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 F8A1P23610 371 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 DLSTP36957 453 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 MAPK9P45984 424 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 MAMLD1Q13495 774 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 KIR2DS5Q14953 304 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 KRT31Q15323 416 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 FHL5Q5TD97 284 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 C6orf15Q6UXA7 325 aaPredicted RBP17.51■□□□□ 0.39
NUP50-218ENST00000493456 TP53INP2Q8IXH6 220 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 RAVER1Q8IY67 606 aaKnown RBP17.51■□□□□ 0.39
NUP50-218ENST00000493456 GALNT11Q8NCW6 608 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 NEK11Q8NG66 645 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 NSMCE1Q8WV22 266 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 PIH1D2Q8WWB5 315 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 SCAMP4Q969E2 229 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 CWC15Q9P013 229 aaKnown RBP17.51■□□□□ 0.39
NUP50-218ENST00000493456 CNOT8Q9UFF9 292 aaKnown RBP17.51■□□□□ 0.39
NUP50-218ENST00000493456 TBC1D29Q9UFV1 150 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms