RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 LPOP22079 712 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SPAM1P38567 509 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 TMPRSS15P98073 1019 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 EIF2B5Q13144 721 aaKnown RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SHBQ15464 509 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 TCEA2Q15560 299 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF423Q2M1K9 1284 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 RNASEH2BQ5TBB1 312 aaKnown RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 ADAMTSL4Q6UY14 1074 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SYDE1Q6ZW31 735 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 RBFAQ8N0V3 343 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SKA1Q96BD8 255 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 WDR92Q96MX6 357 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 TEX101Q9BY14 249 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 ZDHHC5Q9C0B5 715 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 TCEAL2Q9H3H9 227 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SUDS3Q9H7L9 328 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 ARFGAP3Q9NP61 516 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 PHPT1Q9NRX4 125 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-210ENST00000488228 DNAJC28Q9NX36 388 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 SYBUQ9NX95 663 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 KLF15Q9UIH9 416 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 PKP3Q9Y446 797 aa10.99□□□□□ -0.65
UBE4B-210ENST00000488228 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 GLYATL1P3A0A0U1RQE8 302 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 RGSL1A5PLK6 1076 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 TMEM202A6NGA9 273 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 C2orf81A6NN90 581 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 DNALI1O14645 258 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 AVILO75366 819 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 PRAMEF1O95521 474 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 IVDP26440 423 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 MGAT1P26572 445 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 EPHA8P29322 1005 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 CA5AP35218 305 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 TRIM23P36406 574 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 RPL21P46778 160 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 CCT8P50990 548 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 YPEL5P62699 121 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 CHRNA6Q15825 494 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 ALG11Q2TAA5 492 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF648Q5T619 568 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 STPG1Q5TH74 334 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 IL27RAQ6UWB1 636 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 CAND1Q86VP6 1230 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 GATAD2AQ86YP4 633 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 PPIL6Q8IXY8 311 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 RAVER1Q8IY67 606 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 PHACTR4Q8IZ21 702 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 MPP5Q8N3R9 675 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 TRAM1L1Q8N609 369 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 GPR161Q8N6U8 529 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 NAT8LQ8N9F0 302 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 PPHLN1Q8NEY8 458 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 FAM174AQ8TBP5 190 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 OR1E3Q8WZA6 343 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 SERPINB12Q96P63 405 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 PLEKHG4BQ96PX9 1271 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 ELF4Q99607 663 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 ZSCAN5AQ9BUG6 496 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 DPH5Q9H2P9 285 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 IL26Q9NPH9 171 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 MRPL40Q9NQ50 206 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 RAD18Q9NS91 495 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 KCTD5Q9NXV2 234 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 SLC2A6Q9UGQ3 507 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 TCAF1Q9Y4C2 921 aa10.98□□□□□ -0.65
UBE4B-210ENST00000488228 OAS3Q9Y6K5 1087 aaKnown RBP10.98□□□□□ -0.65
UBE4B-210ENST00000488228 A0A1B0GTQ1 180 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 HEATR9A2RTY3 570 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 EFCAB8A8MWE9 144 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 FOXD2O60548 495 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 MTX2O75431 263 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 BANF1O75531 89 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 SEC31AO94979 1220 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 PRSS56P0CW18 603 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 NME1P15531 152 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 HTR1BP28222 390 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 TEAD1P28347 426 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 POLD2P49005 469 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ARRB1P49407 418 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ARSDP51689 593 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 CDK16Q00536 496 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 PTK2BQ14289 1009 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 SMAD1Q15797 465 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ATP13A5Q4VNC0 1218 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 KHDC1Q4VXA5 237 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 C8orf74Q6P047 294 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 LRRC8BQ6P9F7 803 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 MARK2Q7KZI7 788 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 RD3Q7Z3Z2 195 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 DCP2Q8IU60 420 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms