RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLC30A1Q9Y6M5 507 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 LRP4O75096 1905 aa11.34□□□□□ -0.59
NUP50-216ENST00000486184 TDRD6O60522 2096 aaKnown RBP11.34□□□□□ -0.59
NUP50-216ENST00000486184 A0A1W2PR77 199 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 MAGEB16A2A368 324 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PATE3B3GLJ2 98 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 INPP4BO15327 924 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 LDB2O43679 373 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 AVILO75366 819 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PRAMEF1O95521 474 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 MYCLP1P12525 358 aaPredicted RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 PAMP19021 973 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 ITGALP20701 1170 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 TEAD1P28347 426 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PRAMEP78395 509 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 CRADDP78560 199 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 MSLNQ13421 630 aaPredicted RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 HIF1AQ16665 826 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 BBS9Q3SYG4 887 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 TSTD2Q5T7W7 516 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 HENMT1Q5T8I9 393 aaKnown RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 ARMC3Q5W041 872 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 DUPD1Q68J44 220 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PDPK2PQ6A1A2 396 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 CAND1Q86VP6 1230 aaKnown RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 HEATR4Q86WZ0 1026 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 OR13C4Q8NGS5 318 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 GDAP1Q8TB36 358 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP50-216ENST00000486184 HIC2Q96JB3 615 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 DNAJC1Q96KC8 554 aaKnown RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 BMFQ96LC9 184 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 GTPBP2Q9BX10 602 aaKnown RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 ZDHHC5Q9C0B5 715 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 SMOC1Q9H4F8 434 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 GDF3Q9NR23 364 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 FAM114A2Q9NRY5 505 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 SEMA4GQ9NTN9 838 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 NLE1Q9NVX2 485 aaPredicted RBP11.33□□□□□ -0.6
NUP50-216ENST00000486184 ANKRD6Q9Y2G4 727 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 PCDH15Q96QU1 1955 aa11.33□□□□□ -0.6
NUP50-216ENST00000486184 MROH6A6NGR9 719 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 K7ESM1 405 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 ASMTLO95671 621 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CER1O95813 267 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 WNT1P04628 370 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 MC4RP32245 332 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 ARRB1P49407 418 aaPredicted RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 PLTPP55058 493 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 NXPH1P58417 271 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 KIAA1024LP59773 190 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 PFN3P60673 137 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CDK3Q00526 305 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 GRIK2Q13002 908 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 PTPRCAPQ14761 206 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 NFATC4Q14934 902 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CSRP2Q16527 193 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 ADAMTSL4Q6UY14 1074 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 MACC1Q6ZN28 852 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CENPUQ71F23 418 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 OXR1Q8N573 874 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 OTUD6BQ8N6M0 293 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 PEX13Q92968 403 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 STAMBPL1Q96FJ0 436 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 ASB8Q9H765 288 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 MRM3Q9HC36 420 aaKnown RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 CAPN10Q9HC96 672 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 EPB41L5Q9HCM4 733 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 IL26Q9NPH9 171 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CHRAC1Q9NRG0 131 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 KLQ9UEF7 1012 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
NUP50-216ENST00000486184 CRLS1Q9UJA2 301 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 MOSPD1Q9UJG1 213 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 SOX13Q9UN79 622 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 CACNA1EQ15878 2313 aa11.32□□□□□ -0.6
NUP50-216ENST00000486184 ZFC3H1O60293 1989 aaKnown RBP11.31□□□□□ -0.6
NUP50-216ENST00000486184 SPTY2D1-AS1A0A0U1RR47 76 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 FADS2P1A8MWK0 482 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 H3BM21 787 aa11.31□□□□□ -0.6
NUP50-216ENST00000486184 CCL22O00626 93 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms