RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 JMJD7P0C870 316 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GOLGA6DP0CG33 693 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 CCNCP24863 283 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 SERPINB6P35237 376 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GJC1P36383 396 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 SSR1P43307 286 aaKnown RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GPR1P46091 355 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 CYP4F2P78329 520 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 ITKQ08881 620 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 ZBTB17Q13105 803 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PDK2Q15119 407 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 QPCTQ16769 361 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 TSR1Q2NL82 804 aaKnown RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PHF19Q5T6S3 580 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 RAET1GQ6H3X3 334 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 USP45Q70EL2 814 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 B4GALNT4Q76KP1 1039 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 MARK2Q7KZI7 788 aaKnown RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 VASH2Q86V25 355 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PIM3Q86V86 326 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF761Q86XN6 746 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PLD5Q8N7P1 536 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF564Q8TBZ8 553 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 FATE1Q969F0 183 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 TRIB3Q96RU7 358 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 LYSMD1Q96S90 227 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 CMKLR1Q99788 373 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF670Q9BS34 389 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 XPO4Q9C0E2 1151 aaKnown RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 STRADBQ9C0K7 418 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 BRD8Q9H0E9 1235 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 KCTD5Q9NXV2 234 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GOLGA6AQ9NYA3 693 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 DTLQ9NZJ0 730 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 CTTNBP2NLQ9P2B4 639 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 TBC1D29Q9UFV1 150 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 OAS3Q9Y6K5 1087 aaKnown RBP6.98□□□□□ -1.29
HDAC3-207ENST00000475549 A6NCN8 305 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CAPN8A6NHC0 703 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 RHPN2P1A8MT19 583 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ANKRD66B4E2M5 251 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 B8ZZF3 427 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 JCHAINP01591 159 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 THRAP10827 490 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 LIPCP11150 499 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF30P17039 623 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ITGB6P18564 788 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CES1P23141 567 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 KDELR1P24390 212 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ACTR1BP42025 376 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CD86P42081 329 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 GPR3P46089 330 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 LIMK2P53671 638 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 MAPK10P53779 464 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ACTR1AP61163 376 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 PPIDQ08752 370 aaKnown RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 SLC18A3Q16572 532 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 IFI16Q16666 785 aaKnown RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 HADHQ16836 314 aaKnown RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 HENMT1Q5T8I9 393 aaKnown RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 IYDQ6PHW0 289 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF765Q7L2R6 523 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 BBS5Q8N3I7 341 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 SFRP1Q8N474 314 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 BMPERQ8N8U9 685 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 LPCAT1Q8NF37 534 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 OR4D9Q8NGE8 314 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 EXD1Q8NHP7 514 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 SLC35G2Q8TBE7 412 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 KIAA1524Q8TCG1 905 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 SLC37A2Q8TED4 501 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 NSMCE1Q8WV22 266 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 HTR3CQ8WXA8 447 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 JPH3Q8WXH2 748 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 EXTL1Q92935 676 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 TMEM159Q96B96 161 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 TADA1Q96BN2 335 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 MED8Q96G25 268 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 RNF157Q96PX1 679 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 OR2M4Q96R27 311 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 DNAJC7Q99615 494 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CHP1Q99653 195 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 CEP41Q9BYV8 373 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 SPRY4Q9C004 299 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 PCDH9Q9HC56 1237 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 OCIAD1Q9NX40 245 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.97□□□□□ -1.29
HDAC3-207ENST00000475549 PDP2Q9P2J9 529 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ZNHIT2Q9UHR6 403 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 ADGRG1Q9Y653 693 aa6.97□□□□□ -1.29
HDAC3-207ENST00000475549 C1orf232A0A0U1RR37 186 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 AURKAO14965 403 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 H2AFZP0C0S5 128 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM253P0C7T8 217 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 MAN1A1P33908 653 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 FASLGP48023 281 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms