RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ROPN1Q9HAT0 212 aaPredicted RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 FBRSL1Q9HCM7 1045 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 MOCS1Q9NZB8 636 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 EDARQ9UNE0 448 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PXDNQ92626 1479 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PIK3CDO00329 1044 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 IFNGP01579 166 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 FGFR3P22607 806 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CPN2P22792 545 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 MATKP42679 507 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 GUCY1A3Q02108 690 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 BNIPLQ7Z465 357 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ZNF611Q8N823 705 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 EXOSC8Q96B26 276 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 SLC38A2Q96QD8 506 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 MAP3K3Q99759 626 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 LMAN1LQ9HAT1 526 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 NOP53Q9NZM5 478 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 USP32Q8NFA0 1604 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 KCPQ6ZWJ8 1503 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 SERPINB7O75635 380 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 PDE9AO76083 593 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CA3P07451 260 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ARCN1P48444 511 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 SLC1A6P48664 564 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 DEFA1P59665 94 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 DEFA3P59666 94 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 HSF2Q03933 536 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 LRP8Q14114 963 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CPSF6Q16630 551 aaKnown RBP eCLIP8.55□□□□□ -1.04
CD47-204ENST00000471694 ADAMTSL2Q86TH1 951 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 SAPCD2Q86UD0 394 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 RASSF1Q9NS23 344 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 TMEM120BA0PK00 339 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 IQCF5A8MTL0 148 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 PHGDHO43175 533 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 FASTKQ14296 549 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 ANXA8L1Q5VT79 327 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 WDR59Q6PJI9 974 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ABHD15Q6UXT9 468 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 TC2NQ8N9U0 490 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 TBL1XR1Q9BZK7 514 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 ETNK2Q9NVF9 386 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 FAM234BA2RU67 622 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 NPEPPSL1A6NEC2 478 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 WTIPA6NIX2 430 aaPredicted RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 SIGLEC16A6NMB1 481 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 AHCYP23526 432 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 RPL38P63173 70 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 LARS2Q15031 903 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 GDPD4Q6W3E5 623 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 DAW1Q8N136 415 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 C19orf18Q8NEA5 215 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ZDHHC12Q96GR4 267 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 VCPIP1Q96JH7 1222 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CNBD2Q96M20 576 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 TRIM43BA6NCK2 446 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ULK1O75385 1050 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 SNX4O95219 450 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CLCN5P51795 746 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ZNF143P52747 638 aaPredicted RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 GNA12Q03113 381 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 CACNG1Q06432 222 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 SAMD4BQ5PRF9 694 aaKnown RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 ZCCHC12Q6PEW1 402 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 IQCF2Q8IXL9 164 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 ANKFN1Q8N957 763 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 DCAKDQ8WVC6 231 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 AZIN2Q96A70 460 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 MFSD14AQ96MC6 490 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 WHRNQ9P202 907 aa8.55□□□□□ -1.04
CD47-204ENST00000471694 INO80Q9ULG1 1556 aaPredicted RBP8.55□□□□□ -1.04
CD47-204ENST00000471694 TIMP1P01033 207 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 C4BPBP20851 252 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 KCNMA1Q12791 1236 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 TTC33Q6PID6 262 aaPredicted RBP8.54□□□□□ -1.04
CD47-204ENST00000471694 HSDL2Q6YN16 418 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 TCAIMQ8N3R3 496 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 LNX2Q8N448 690 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 BRSK1Q8TDC3 778 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 RNF31Q96EP0 1072 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 POLR1AO95602 1720 aaPredicted RBP8.54□□□□□ -1.04
CD47-204ENST00000471694 ZNF500O60304 480 aaPredicted RBP8.54□□□□□ -1.04
CD47-204ENST00000471694 OTCP00480 354 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 CCNOP22674 350 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 KDELR1P24390 212 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 PRMT9Q6P2P2 845 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 RHBDF2Q6PJF5 856 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 SLC36A4Q6YBV0 504 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 SLC22A15Q8IZD6 547 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 KAT5Q92993 513 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 HDAC10Q969S8 669 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 NSMCE2Q96MF7 247 aa8.54□□□□□ -1.04
CD47-204ENST00000471694 CCNL2Q96S94 520 aaPredicted RBP8.54□□□□□ -1.04
CD47-204ENST00000471694 ARHGAP39Q9C0H5 1083 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms