RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TRIM24O15164 1050 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 KMOO15229 486 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 OGTO15294 1046 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CCNDBP1O95273 360 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PTBP3O95758 552 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 APOEP02649 317 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 MYF5P13349 255 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CCDC130P13994 396 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 HOXB8P17481 243 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 NR2F2P24468 414 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 ITGB8P26012 769 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 NMT1P30419 496 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 ALDH3A1P30838 453 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 GZMKP49863 264 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 MANFP55145 182 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 YPEL5P62699 121 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 FAM189BP81408 668 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 UBE3AQ05086 875 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CDC20Q12834 499 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PPIL2Q13356 520 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 THOC5Q13769 683 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SLC39A14Q15043 492 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 POLD3Q15054 466 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 KRT31Q15323 416 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 NDUFA5Q16718 116 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 MYLK3Q32MK0 819 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 LEXMQ3ZCV2 418 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SGO1Q5FBB7 561 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 THEM4Q5T1C6 240 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 FAXCQ5TGI0 409 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 ZNF658Q5TYW1 1059 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 FNDC7Q5VTL7 733 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 ANKRD40Q6AI12 368 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 TANGO2Q6ICL3 276 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CASC4Q6P4E1 433 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 FAM171BQ6P995 826 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SUSD1Q6UWL2 747 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PET117Q6UWS5 81 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 STXBP4Q6ZWJ1 553 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 USP49Q70CQ1 688 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 KRT28Q7Z3Y7 464 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 DSG4Q86SJ6 1040 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 DNAAF5Q86Y56 855 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SCN4BQ8IWT1 228 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 HACE1Q8IYU2 909 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SYNE4Q8N205 404 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CSGALNACT2Q8N6G5 542 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 TEX47Q8TBZ9 253 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 DYDC1Q8WWB3 177 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SLC13A3Q8WWT9 602 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SEPT8Q92599 483 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 MR1Q95460 341 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 FAM162AQ96A26 154 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SPDL1Q96EA4 605 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 KTI12Q96EK9 354 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CHMP6Q96FZ7 201 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 ZBED3Q96IU2 234 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CFAP57Q96MR6 1250 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PANX2Q96RD6 677 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 GPR63Q9BZJ6 419 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CENPHQ9H3R5 247 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SH2D4AQ9H788 454 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 COQ10BQ9H8M1 238 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 TMEM8AQ9HCN3 771 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 BATF3Q9NR55 127 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 DDX28Q9NUL7 540 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 AGPAT5Q9NUQ2 364 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 DDX43Q9NXZ2 648 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 PKD2L2Q9NZM6 624 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 LIPT1Q9Y234 373 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 REXO2Q9Y3B8 237 aaKnown RBP5.73□□□□□ -1.49
LRCH3-212ENST00000466845 POMT1Q9Y6A1 747 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 NHSL1Q5SYE7 1610 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 SPATA31E1Q6ZUB1 1445 aa5.73□□□□□ -1.49
LRCH3-212ENST00000466845 CDC42BPGQ6DT37 1551 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 C1orf167Q5SNV9 1468 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 COL15A1P39059 1388 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 KNDC1Q76NI1 1749 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 FAM47DPA6NHR8 397 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 CCDC154A6NI56 674 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 PTGES3LE9PB15 166 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 SLCO1B7G3V0H7 640 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 H3BNC9 293 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 DNM1LO00429 736 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 ZNF263O14978 683 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 MED24O75448 989 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 PIGNO95427 931 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 CSTAP01040 98 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 IFNA14P01570 189 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 ALDH2P05091 517 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 LIPFP07098 398 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 ERVK-10P10266 1014 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 ARP10275 920 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 LAMP2P13473 410 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 KRT4P19013 534 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 HTR1BP28222 390 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 TM4SF1P30408 202 aa5.72□□□□□ -1.49
LRCH3-212ENST00000466845 SLC5A2P31639 672 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms