RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 RENBPP51606 427 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 UBE2HP62256 183 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 KLRB1Q12918 225 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 DPYSQ14117 519 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 C4orf17Q53FE4 359 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 PYCR3Q53H96 274 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 SNAP47Q5SQN1 464 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 HIST2H2BCQ6DN03 193 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 TECPR1Q7Z6L1 1165 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 ARFGAP1Q8N6T3 406 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 PDCD6IPQ8WUM4 868 aaKnown RBP11.7□□□□□ -0.54
CNOT4-208ENST00000465721 ZNF599Q96NL3 588 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 NUDCD1Q96RS6 583 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 MGME1Q9BQP7 344 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 ZPBPQ9BS86 351 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 TMEM98Q9Y2Y6 226 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 PCYT1BQ9Y5K3 369 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-208ENST00000465721 MRPS18BQ9Y676 258 aaKnown RBP11.7□□□□□ -0.54
CNOT4-208ENST00000465721 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
CNOT4-208ENST00000465721 SEC16AO15027 2179 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MN1Q10571 1320 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 A6NCN8 305 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 CYP2A6P11509 494 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 TCN2P20062 427 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 F8A1P23610 371 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MAN1A1P33908 653 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 HSPA9P38646 679 aaKnown RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 GPR1P46091 355 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MC1RQ01726 317 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 LRP8Q14114 963 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 SEPT6Q14141 434 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MAP7Q14244 749 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 BECN1Q14457 450 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 ZNF235Q14590 738 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 KRT31Q15323 416 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 CDKAL1Q5VV42 579 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 C16orf46Q6P387 395 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 DCUN1D2Q6PH85 259 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MARK2Q7KZI7 788 aaKnown RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 SCRN2Q96FV2 425 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 AHCYL2Q96HN2 611 aaKnown RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 ABCG8Q9H221 673 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 TRIT1Q9H3H1 467 aaKnown RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 NOD2Q9HC29 1040 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 SEPT11Q9NVA2 429 aaKnown RBP11.69□□□□□ -0.54
CNOT4-208ENST00000465721 CD84Q9UIB8 345 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 PHTF1Q9UMS5 762 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 KCTD3Q9Y597 815 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
CNOT4-208ENST00000465721 TRBV23OR9-2A0A075B6M9 112 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 DAPK3O43293 454 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 PGLSO95336 258 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 KRT7P08729 469 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 PSMA2P25787 234 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 EPHA4P54764 986 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 MLLT10P55197 1068 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 HHEXQ03014 270 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 MAMLD1Q13495 774 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 PPP6R3Q5H9R7 873 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-208ENST00000465721 ERMARDQ5T6L9 678 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 TCTN3Q6NUS6 607 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 USP45Q70EL2 814 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 ZNF765Q7L2R6 523 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 ATCAYQ86WG3 371 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 GALNT13Q8IUC8 556 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 ESX1Q8N693 406 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 NCSTNQ92542 709 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 SCAMP4Q969E2 229 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 AP2M1Q96CW1 435 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 COX14Q96I36 57 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 SMIM14Q96QK8 99 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 AGAP2Q99490 1192 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 AGPAT1Q99943 283 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
CNOT4-208ENST00000465721 TAS2R14Q9NYV8 317 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
CNOT4-208ENST00000465721 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 DACH1Q9UI36 760 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 PPIL1Q9Y3C6 166 aa11.68□□□□□ -0.54
CNOT4-208ENST00000465721 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
CNOT4-208ENST00000465721 MAFKO60675 156 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 DNAJC6O75061 913 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 FURINP09958 794 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 ZNF28P17035 718 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 DESP17661 470 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 CTPS1P17812 591 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 NFKBIAP25963 317 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 HCAR3P49019 387 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 PPM1FP49593 454 aaPredicted RBP11.67□□□□□ -0.54
CNOT4-208ENST00000465721 MAXP61244 160 aa11.67□□□□□ -0.54
CNOT4-208ENST00000465721 NFATC2Q13469 925 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms