RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 KATNAL2Q8IYT4 538 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 GPR156Q8NFN8 814 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 KIAA1524Q8TCG1 905 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 IMP4Q96G21 291 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 RBM41Q96IZ5 413 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 OR2M4Q96R27 311 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 DESI2Q9BSY9 194 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 SPATA16Q9BXB7 569 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 ADGRE3Q9BY15 652 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 GSDMCQ9BYG8 508 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 GPR63Q9BZJ6 419 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 CDH19Q9H159 772 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 SLC25A51Q9H1U9 297 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 GLOD4Q9HC38 313 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 SPATS2LQ9NUQ6 558 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 TAAR2Q9P1P5 351 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
USP54-207ENST00000451492 REXO2Q9Y3B8 237 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 ZNF711Q9Y462 761 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 EPN1Q9Y6I3 576 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 OAS3Q9Y6K5 1087 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 ANKRD11Q6UB99 2663 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 A0A1W2PQM1 296 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 FADS2P1A8MWK0 482 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 D6RAR5 112 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 H7C0C1 242 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 RRP8O43159 456 aaKnown RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 TCEA3O75764 348 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ZRANB2O95218 330 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP54-207ENST00000451492 ECEL1O95672 775 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 HGFP14210 728 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 CTNNA2P26232 953 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ATP5OP48047 213 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 SPINT3P49223 89 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 CDK18Q07002 472 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP54-207ENST00000451492 TCEAL1Q15170 157 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 TBC1D25Q3MII6 688 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 TEX44Q53QW1 395 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 CERCAMQ5T4B2 595 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ADAMTSL4Q6UY14 1074 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ZNF765Q7L2R6 523 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ZNF761Q86XN6 746 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 GALNT13Q8IUC8 556 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 TMTC1Q8IUR5 882 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 CBARPQ8N350 705 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 SLC25A41Q8N5S1 370 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 EXD1Q8NHP7 514 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 GPBAR1Q8TDU6 330 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 HIC2Q96JB3 615 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 QKIQ96PU8 341 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP54-207ENST00000451492 WDR24Q96S15 920 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 BAG1Q99933 345 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 HERPUD2Q9BSE4 406 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 LACRTQ9GZZ8 138 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 LRRN3Q9H3W5 708 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 POLR1BQ9H9Y6 1135 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 BPIFA1Q9NP55 256 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 TRIM10Q9UDY6 481 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 RSPH14Q9UHP6 348 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 PACSIN2Q9UNF0 486 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 SLC17A4Q9Y2C5 497 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 PCYT1BQ9Y5K3 369 aaPredicted RBP9.62□□□□□ -0.87
USP54-207ENST00000451492 ST14Q9Y5Y6 855 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 PKD1L2Q7Z442 2459 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 UNC13CQ8NB66 2214 aa9.62□□□□□ -0.87
USP54-207ENST00000451492 NTN3O00634 580 aaPredicted RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 AURKAO14965 403 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 BUD23O43709 281 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 MTX2O75431 263 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 FGF1P05230 155 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 PTMAP06454 111 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 IVLP07476 585 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 ACP5P13686 325 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 GLB1P16278 677 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 TEAD1P28347 426 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 RBL1P28749 1068 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 ALDH4A1P30038 563 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 CTNNA1P35221 906 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 CHRNA4P43681 627 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 NR2C2P49116 596 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 VAV2P52735 878 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 INHBCP55103 352 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 PCBP4P57723 403 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 OR1D5P58170 312 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 RPL26P61254 145 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 OTUD4Q01804 1114 aaKnown RBP9.61□□□□□ -0.87
USP54-207ENST00000451492 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
USP54-207ENST00000451492 ZNF569Q5MCW4 686 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms