RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZFATQ9P243 1243 aa13.99□□□□□ -0.17
SHMT2-203ENST00000449049 VPS18Q9P253 973 aa13.99□□□□□ -0.17
SHMT2-203ENST00000449049 MARCH4Q9P2E8 410 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-203ENST00000449049 FNDC3AQ9Y2H6 1198 aaKnown RBP13.99□□□□□ -0.17
SHMT2-203ENST00000449049 SLC30A1Q9Y6M5 507 aa13.99□□□□□ -0.17
SHMT2-203ENST00000449049 TRIOO75962 3097 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 EXOC1LA0A1B0GW35 172 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 PRR23AA6NEV1 266 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 AXIN1O15169 862 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 CD3EAPO15446 510 aaKnown RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 ITGALP20701 1170 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 OGNP20774 298 aaKnown RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 NFATC2Q13469 925 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 FGL2Q14314 439 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 FASTKD1Q53R41 847 aaKnown RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 SNX20Q7Z614 316 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 SLC26A11Q86WA9 606 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 C2CD4AQ8NCU7 369 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 OR2W6PQ8NHA6 318 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 GABPB2Q8TAK5 448 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 SCG3Q8WXD2 468 aaKnown RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 ZIM3Q96PE6 472 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 CCDC77Q9BR77 488 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 ZSCAN5AQ9BUG6 496 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
SHMT2-203ENST00000449049 EPHX3Q9H6B9 360 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 VIPAS39Q9H9C1 493 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 NSMCE4AQ9NXX6 385 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 SLC17A6Q9P2U8 582 aa13.98□□□□□ -0.17
SHMT2-203ENST00000449049 TRBV5-4A0A0C4DH59 114 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 FAM47DPA6NHR8 397 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 VGLL3A8MV65 326 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 LAMTOR5O43504 91 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TCEA3O75764 348 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PIAS1O75925 651 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 GCAP28676 217 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SLC1A2P43004 574 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 EIF3BP55884 814 aaKnown RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 DMWDQ09019 674 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SEMA3AQ14563 771 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TERF2Q15554 542 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TYSND1Q2T9J0 566 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ZNF470Q6ECI4 717 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 MRNIPQ6NTE8 343 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PSAPL1Q6NUJ1 521 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 LRIG3Q6UXM1 1119 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 KIAA0408Q6ZU52 694 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 GALNT7Q86SF2 657 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 LRRC6Q86X45 466 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 CILP2Q8IUL8 1156 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 C1orf210Q8IVY1 113 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 FRMD1Q8N878 549 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ZNF398Q8TD17 642 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 RLN3Q8WXF3 142 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SLC17A9Q9BYT1 436 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PPCSQ9HAB8 311 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TNFRSF10AO00220 468 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 MAP2K7O14733 419 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 GPR39O43194 453 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 LATO43561 262 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SOD1P00441 154 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 CCR5P51681 352 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 GPR33Q49SQ1 333 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ATP13A5Q4VNC0 1218 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 AARS2Q5JTZ9 985 aaKnown RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 DENND6AQ8IWF6 608 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 CTAGE3PQ8IX95 158 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PIANPQ8IYJ0 282 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 KRT222Q8N1A0 295 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 FAM160A2Q8N612 972 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PPM1NQ8N819 430 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TP53I13Q8NBR0 393 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SLC44A1Q8WWI5 657 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PAFAH2Q99487 392 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 TMEM109Q9BVC6 243 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SPATA16Q9BXB7 569 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 C6orf106Q9H6K1 298 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-203ENST00000449049 ASB8Q9H765 288 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 SMOXQ9NWM0 555 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 FBXO5Q9UKT4 447 aa13.97□□□□□ -0.17
SHMT2-203ENST00000449049 PLXNB3Q9ULL4 1909 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 EML5Q05BV3 1969 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 FADS2P1A8MWK0 482 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 IVLP07476 585 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 CA5AP35218 305 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 ZNF844Q08AG5 666 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 SGCGQ13326 291 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 CTBP1Q13363 440 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 WSCD2Q2TBF2 565 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 KIAA0895LQ68EN5 471 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 TSSK4Q6SA08 328 aa13.96□□□□□ -0.17
SHMT2-203ENST00000449049 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms