RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PAPLNO95428 1278 aa6□□□□□ -1.45
VPS50-205ENST00000441602 PRAMEF1O95521 474 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KITP10721 976 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ESRRAP11474 423 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 GFAPP14136 432 aa6□□□□□ -1.45
VPS50-205ENST00000441602 STK19P49842 368 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 RPL14P50914 215 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 ADARP55265 1226 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 IHHQ14623 411 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KRT72Q14CN4 511 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DGKKQ5KSL6 1271 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FAM91A1Q658Y4 838 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SEL1L3Q68CR1 1132 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KIAA0907Q7Z7F0 614 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 ADGRD2Q7Z7M1 963 aa6□□□□□ -1.45
VPS50-205ENST00000441602 LDB1Q86U70 411 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
VPS50-205ENST00000441602 TNS4Q8IZW8 715 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CENPLQ8N0S6 344 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 MYO1HQ8N1T3 1032 aa6□□□□□ -1.45
VPS50-205ENST00000441602 NAT16Q8N8M0 369 aa6□□□□□ -1.45
VPS50-205ENST00000441602 RHEBL1Q8TAI7 183 aa6□□□□□ -1.45
VPS50-205ENST00000441602 GDPD5Q8WTR4 605 aa6□□□□□ -1.45
VPS50-205ENST00000441602 INPP5DQ92835 1189 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SCRN2Q96FV2 425 aa6□□□□□ -1.45
VPS50-205ENST00000441602 NSL1Q96IY1 281 aa6□□□□□ -1.45
VPS50-205ENST00000441602 RMDN2Q96LZ7 410 aa6□□□□□ -1.45
VPS50-205ENST00000441602 OLFM1Q99784 485 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DERL2Q9GZP9 239 aa6□□□□□ -1.45
VPS50-205ENST00000441602 TRPV4Q9HBA0 871 aa6□□□□□ -1.45
VPS50-205ENST00000441602 BPIFA1Q9NP55 256 aa6□□□□□ -1.45
VPS50-205ENST00000441602 IGSF5Q9NSI5 407 aa6□□□□□ -1.45
VPS50-205ENST00000441602 GTSE1Q9NYZ3 720 aa6□□□□□ -1.45
VPS50-205ENST00000441602 MARCOQ9UEW3 520 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
VPS50-205ENST00000441602 PPIL1Q9Y3C6 166 aa6□□□□□ -1.45
VPS50-205ENST00000441602 C1QTNF3-AMACRE9PGA6 284 aa6□□□□□ -1.45
VPS50-205ENST00000441602 TK2O00142 265 aa6□□□□□ -1.45
VPS50-205ENST00000441602 HGSO14964 777 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 KPNA5O15131 536 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DIAPH2O60879 1101 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CRCPO75575 148 aa6□□□□□ -1.45
VPS50-205ENST00000441602 IPO13O94829 963 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 ALPIP09923 528 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DGKAP23743 735 aa6□□□□□ -1.45
VPS50-205ENST00000441602 HNF1BP35680 557 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CSRP3P50461 194 aa6□□□□□ -1.45
VPS50-205ENST00000441602 NAGLUP54802 743 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ELP6Q0PNE2 266 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CBX2Q14781 532 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 EML3Q32P44 896 aa6□□□□□ -1.45
VPS50-205ENST00000441602 METTL21CQ5VZV1 264 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FAM151BQ6UXP7 276 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DPY19L3Q6ZPD9 716 aa6□□□□□ -1.45
VPS50-205ENST00000441602 Q6ZVU0 165 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FRA10AC1Q70Z53 315 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ADAMTSL2Q86TH1 951 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SERPINA9Q86WD7 417 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SGF29Q96ES7 293 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KLHL32Q96NJ5 620 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ASB16Q96NS5 453 aa6□□□□□ -1.45
VPS50-205ENST00000441602 PLEKHG4BQ96PX9 1271 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CCDC28BQ9BUN5 200 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ALG9Q9H6U8 611 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ELOVL2Q9NXB9 296 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ZDHHC3Q9NYG2 299 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
VPS50-205ENST00000441602 DKK3Q9UBP4 350 aa6□□□□□ -1.45
VPS50-205ENST00000441602 IL36AQ9UHA7 158 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FBXO10Q9UK96 956 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CLEC4EQ9ULY5 219 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CDYLQ9Y232 598 aa6□□□□□ -1.45
VPS50-205ENST00000441602 MTCL1Q9Y4B5 1905 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 CHD5Q8TDI0 1954 aa6□□□□□ -1.45
VPS50-205ENST00000441602 HDAC3O15379 428 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 DLX3O60479 287 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 MAGEC1O60732 1142 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TOP3BO95985 862 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 CHEK2O96017 543 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 SERPINA6P08185 405 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 OR56A5P0C7T3 313 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ZNF37AP17032 561 aaPredicted RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 CTSOP43234 321 aaPredicted RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 PTPRCAPQ14761 206 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 GALNTL6Q49A17 601 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 FAM78AQ5JUQ0 283 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 C6orf163Q5TEZ5 329 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ANKRD54Q6NXT1 300 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 TRIM67Q6ZTA4 783 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 MTSS1LQ765P7 747 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 MTDHQ86UE4 582 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 RAVER1Q8IY67 606 aaKnown RBP5.99□□□□□ -1.45
VPS50-205ENST00000441602 C10orf67Q8IYJ2 551 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 FBXO39Q8N4B4 442 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 SUSD6Q92537 303 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 EXT2Q93063 718 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 KIAA1191Q96A73 305 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ECHDC3Q96DC8 303 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 UBXN10Q96LJ8 280 aa5.99□□□□□ -1.45
VPS50-205ENST00000441602 ZSWIM3Q96MP5 696 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms