RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MTF2Q9Y483 593 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 PCDHB3Q9Y5E6 796 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 IGKV6D-21A0A0A0MT36 114 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SLC35F4A4IF30 521 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 APOL1O14791 398 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 NCAM2O15394 837 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 HOXC11O43248 304 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 GH2P01242 217 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CAPN3P20807 821 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 NR4A1P22736 598 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ARNTP27540 789 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GMPRP36959 345 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 LIG4P49917 911 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KCNAB2Q13303 367 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PAFAH1B3Q15102 231 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 TECRLQ5HYJ1 363 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SH3PXD2AQ5TCZ1 1133 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PIWIL3Q7Z3Z3 882 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 THAP5Q7Z6K1 395 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CHCHD4Q8N4Q1 142 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ASCC1Q8N9N2 400 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 SLC35F5Q8WV83 523 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FCRL3Q96P31 734 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 AGAP2Q99490 1192 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KIFC1Q9BW19 673 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 C1QTNF3Q9BXJ4 246 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CMTM6Q9NX76 183 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 C3orf18Q9UK00 162 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 DOPEY2Q9Y3R5 2298 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GOLGA8CPA6NN73 597 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FAM25AB3EWG3 89 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FAM25CB3EWG5 89 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FAM25GB3EWG6 89 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SNPHO15079 494 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GAS2O43903 313 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 MTRF1O75570 445 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 RCVRNP35243 200 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 EMX1Q04741 257 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 DNASE1L3Q13609 305 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 LAMC2Q13753 1193 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 RFX4Q33E94 735 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PROX2Q3B8N5 592 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 XKR9Q5GH70 373 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TBCELQ5QJ74 424 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 HEATR6Q6AI08 1181 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 AKAP14Q86UN6 197 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ZDHHC13Q8IUH4 622 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PDZD8Q8NEN9 1154 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ELMO3Q96BJ8 720 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CDHR1Q96JP9 859 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 UGT2B28Q9BY64 529 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 MTMR12Q9C0I1 747 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GORASP2Q9H8Y8 452 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TNFRSF12AQ9NP84 129 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ATP13A2Q9NQ11 1180 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 POLR3BQ9NW08 1133 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 BAG5Q9UL15 447 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TRAPPC4Q9Y296 219 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ERVH48-1M5A8F1 160 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 CFLARO15519 480 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 CILPO75339 1184 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 CRYZL1O95825 349 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 SLURP2P0DP57 97 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 TAS2R39P59534 338 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 PRKCDQ05655 676 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 SLC13A2Q13183 592 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 PERM1Q5SV97 790 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 FAM102AQ5T9C2 384 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 SYCE2Q6PIF2 218 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 TBPL2Q6SJ96 375 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 NPNTQ6UXI9 565 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 CYP2R1Q6VVX0 501 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 IFNLR1Q8IU57 520 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 FBXL6Q8N531 539 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 ACVR1CQ8NER5 493 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 ZBTB45Q96K62 511 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 LRRC3Q9BY71 257 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 NIFKQ9BYG3 293 aaKnown RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 SEMA6AQ9H2E6 1030 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 KLQ9UEF7 1012 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 FBXO40Q9UH90 709 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 INPP4BO15327 924 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 SYNCRIPO60506 623 aaKnown RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 JAG1P78504 1218 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 GALK2Q01415 458 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 NFE2Q16621 373 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 KYAT1Q16773 422 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.12□□□□□ -1.59
RIF1-203ENST00000428287 RAB44Q7Z6P3 723 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 DSG4Q86SJ6 1040 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 ZNF280CQ8ND82 737 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 USP13Q92995 863 aaPredicted RBP5.12□□□□□ -1.59
RIF1-203ENST00000428287 CFAP36Q96G28 342 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 DSN1Q9H410 356 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 PRDM12Q9H4Q4 367 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 ALG2Q9H553 416 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 FBXO28Q9NVF7 368 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 FAM118AQ9NWS6 357 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 FBXL12Q9NXK8 326 aa5.12□□□□□ -1.59
RIF1-203ENST00000428287 TBC1D14Q9P2M4 693 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms