RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 STX3Q13277 289 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 ZNF234Q14588 700 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 C6orf89Q6UWU4 347 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 NAPRTQ6XQN6 538 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 STK40Q8N2I9 435 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 RMDN2Q96LZ7 410 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 ACOX2Q99424 681 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 BOCQ9BWV1 1114 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 A0A087X1B8 175 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
FN1-208ENST00000426059 KLF11O14901 512 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 RALBP11234 206 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 CACNG1Q06432 222 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 CHRNA6Q15825 494 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 ATG16L1Q676U5 607 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 TTC7BQ86TV6 843 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 CNPY4Q8N129 248 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 ANKS4BQ8N8V4 417 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 ELSPBP1Q96BH3 223 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 TSPAN17Q96FV3 270 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 RIPOR3Q96MK2 946 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 MCCC1Q96RQ3 725 aaPredicted RBP17.28■□□□□ 0.36
FN1-208ENST00000426059 LYSMD1Q96S90 227 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 HCN2Q9UL51 889 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 PPIL1Q9Y3C6 166 aa17.28■□□□□ 0.36
FN1-208ENST00000426059 NIPSNAP2O75323 286 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 RHOBTB1O94844 696 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 TTPAP49638 278 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 OCRLQ01968 901 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 SETMARQ53H47 684 aaPredicted RBP17.27■□□□□ 0.36
FN1-208ENST00000426059 CTSL3PQ5NE16 218 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 PLPP6Q8IY26 295 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 PBXIP1Q96AQ6 731 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 UBXN10Q96LJ8 280 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 SLC30A3Q99726 388 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 PRO3102Q9H379 93 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 NUMBLQ9Y6R0 609 aa17.27■□□□□ 0.36
FN1-208ENST00000426059 GLYATL1P3A0A0U1RQE8 302 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 NEMP2A6NFY4 417 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 PLK4O00444 970 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 KPNA3O00505 521 aaPredicted RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 C1SP09871 688 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 MYL2P10916 166 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 COL6A2P12110 1019 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 TIMP2P16035 220 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 NFATC2Q13469 925 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 SERPINA9Q86WD7 417 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 MSLNLQ96KJ4 702 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 TCF12Q99081 682 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 TRMT61BQ9BVS5 477 aaKnown RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 CCDC68Q9H2F9 335 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 PCDH12Q9NPG4 1184 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 ABCF3Q9NUQ8 709 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 ITM2BQ9Y287 266 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 TARM1B6A8C7 271 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 WISP3O95389 354 aaPredicted RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 LTA4HP09960 611 aaKnown RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 CCR10P46092 362 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 KCNC1P48547 511 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 SLC1A6P48664 564 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 POLR2LP62875 67 aaKnown RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 DBN1Q16643 649 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 FAM83EQ2M2I3 478 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 C9orf64Q5T6V5 341 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 RNF187Q5TA31 235 aaPredicted RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 BRAT1Q6PJG6 821 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 PAQR3Q6TCH7 311 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 SERPINA13PQ6UXR4 307 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 CLDN19Q8N6F1 224 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 GPR21Q99679 349 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 SARS2Q9NP81 518 aaKnown RBP17.26■□□□□ 0.35
FN1-208ENST00000426059 ARL2BPQ9Y2Y0 163 aa17.26■□□□□ 0.35
FN1-208ENST00000426059 A0A0G2JND7 137 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 C16orf96A6NNT2 1141 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 SNNO75324 88 aaPredicted RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 KAT7O95251 611 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 SPAM1P38567 509 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 IL12RB1P42701 662 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 WASP42768 502 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 ITIH4Q14624 930 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 SPRED3Q2MJR0 410 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 ZNF805Q5CZA5 627 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 ALG9Q9H6U8 611 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 CACNA2D2Q9NY47 1150 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 MUC22E2RYF6 1773 aaPredicted RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 ANKRD12Q6UB98 2062 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 ZBTB14O43829 449 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 DLX3O60479 287 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 PKMP14618 531 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 TFEBP19484 476 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 HNRNPA1L2Q32P51 320 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 EGFLAMQ63HQ2 1017 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 TICRRQ7Z2Z1 1910 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 DENND4AQ7Z401 1863 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms