RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 CD47Q08722 323 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 UGT3A2Q3SY77 523 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 CDONQ4KMG0 1287 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 CUZD1Q86UP6 607 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 GPR78Q96P69 363 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 ZNF300Q96RE9 604 aaPredicted RBP13.17□□□□□ -0.3
CALD1-205ENST00000422748 TBCBQ99426 244 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 COQ7Q99807 217 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 KCTD14Q9BQ13 255 aaPredicted RBP13.17□□□□□ -0.3
CALD1-205ENST00000422748 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 PLEKHA5Q9HAU0 1116 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
CALD1-205ENST00000422748 SOAT2O75908 522 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PGK1P00558 417 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PPP2R2BQ00005 443 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 C19orf57Q0VDD7 668 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PSMD5Q16401 504 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 RBM23Q86U06 439 aaKnown RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 SPNS2Q8IVW8 549 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 SIMC1Q8NDZ2 872 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ASPSCR1Q9BZE9 553 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 EXD2Q9NVH0 621 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 FAM118AQ9NWS6 357 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 NAALAD2Q9Y3Q0 740 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PCM1Q15154 2024 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 UPK1AO00322 258 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 SLC1A7O00341 560 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ANGPT2O15123 496 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 SNX2O60749 519 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ASNSP08243 561 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PIGAP37287 484 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 RGS7P49802 495 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 NPTX1Q15818 432 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 NFE2Q16621 373 aaPredicted RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 RABL3Q5HYI8 236 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CERCAMQ5T4B2 595 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
CALD1-205ENST00000422748 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 AFAP1L2Q8N4X5 818 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ESX1Q8N693 406 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 LSMEM1Q8N8F7 131 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PROX1Q92786 737 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 TMBIM1Q969X1 311 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 LRRC58Q96CX6 371 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 YIPF6Q96EC8 236 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 TAAR1Q96RJ0 339 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 USP22Q9UPT9 525 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ACOT9Q9Y305 439 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 NDUFAF1Q9Y375 327 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PCDHA9Q9Y5H5 950 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 PDZK1P1A8MUH7 402 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 LRIG2O94898 1065 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 NDST3O95803 873 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ARNTP27540 789 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 SDC4P31431 198 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 MAP2K4P45985 399 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 EMC2Q15006 297 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ZNF567Q8N184 647 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 DNAAF3Q8N9W5 541 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 DNAJB14Q8TBM8 379 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■■■■■ 35.3
CALD1-205ENST00000422748 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 KCTD15Q96SI1 283 aaPredicted RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 MBOAT4Q96T53 435 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 GMLQ99445 158 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 ALG2Q9H553 416 aa13.16□□□□□ -0.3
CALD1-205ENST00000422748 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
CALD1-205ENST00000422748 SAGE2PA6NJ88 616 aa13.15□□□□□ -0.3
CALD1-205ENST00000422748 CENPXA8MT69 81 aa13.15□□□□□ -0.3
CALD1-205ENST00000422748 SSX4O60224 188 aa13.15□□□□□ -0.3
CALD1-205ENST00000422748 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
CALD1-205ENST00000422748 UMPSP11172 480 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms