RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 AVILO75366 819 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SOD1P00441 154 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SYPP08247 313 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CTAGE8P0CG41 777 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ENGP17813 658 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 TRIM23P36406 574 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CTSKP43235 329 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 NPY2RP49146 381 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 YPEL5P62699 121 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CRADDP78560 199 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DPTQ07507 201 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 OVGP1Q12889 678 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 PDE1CQ14123 709 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DNTTIP2Q5QJE6 756 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 IZUMO3Q5VZ72 239 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 PRR23CQ6ZRP0 262 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF534Q76KX8 674 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF765Q7L2R6 523 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 PCGF5Q86SE9 256 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CTAGE6Q86UF2 777 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CAND1Q86VP6 1230 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CTAGE4Q8IX94 777 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 PPIL6Q8IXY8 311 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SLC22A18ASQ8N1D0 253 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 NAT8LQ8N9F0 302 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 MCUQ8NE86 351 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 OR4K2Q8NGD2 314 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 OR13C4Q8NGS5 318 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 OR2I1PQ8NGU4 316 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 FUBP1Q96AE4 644 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 LGR4Q9BXB1 951 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 SPATA16Q9BXB7 569 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CAAP1Q9H8G2 361 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 IL26Q9NPH9 171 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 GDF3Q9NR23 364 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 RAD18Q9NS91 495 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 RXFP3Q9NSD7 469 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DOCK9Q9BZ29 2069 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ASH1LQ9NR48 2969 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SPTY2D1-AS1A0A0U1RR47 76 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 MROH6A6NGR9 719 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 FADS2P1A8MWK0 482 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 AP3B1O00203 1094 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CCL22O00626 93 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 INPP4BO15327 924 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A9O60656 530 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ADRB1P08588 477 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 TSHRP16473 764 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A6P19224 532 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A1P22309 533 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A4P22310 534 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ADRA1DP25100 572 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 MGAT1P26572 445 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A3P35503 534 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A5P35504 534 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SPAM1P38567 509 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 RPL21P46778 160 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF140P52738 457 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 THOP1P52888 689 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ITGA8P53708 1063 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ATXN3P54252 364 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 DCDC1P59894 354 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CDK3Q00526 305 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 PDE1BQ01064 536 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SLC7A5Q01650 507 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 PTK2BQ14289 1009 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 FZD2Q14332 565 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CHRNA6Q15825 494 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ST3GAL2Q16842 350 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 HLA-BQ31612 363 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 AASDHQ4L235 1098 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF542PQ5EBM4 170 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 PCID2Q5JVF3 399 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 HENMT1Q5T8I9 393 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ZDHHC20Q5W0Z9 365 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ENPP7Q6UWV6 458 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 FAM151BQ6UXP7 276 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ADAMTSL4Q6UY14 1074 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 MICALCLQ6ZW33 695 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 TRIM74Q86UV6 250 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 HEATR4Q86WZ0 1026 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 DCP2Q8IU60 420 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 MMGT1Q8N4V1 131 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 TRAM1L1Q8N609 369 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CEP112Q8N8E3 955 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 NOA1Q8NC60 698 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SNF8Q96H20 258 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 DNAJC1Q96KC8 554 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SERPINB12Q96P63 405 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ERP44Q9BS26 406 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 LRRC1Q9BTT6 524 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CARD6Q9BX69 1037 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 TEX101Q9BY14 249 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ZDHHC5Q9C0B5 715 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms