RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 MUC3BQ9H195 1237 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 HTTP42858 3142 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 CCDC154A6NI56 674 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 NCAM2O15394 837 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 MTSS1O43312 755 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 STRNO43815 780 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 RBP1P09455 135 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 ODC1P11926 461 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 MAGEA6P43360 314 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 GATMP50440 423 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 MAMDC4Q6UXC1 1216 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 CATSPER1Q8NEC5 780 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 KLHDC9Q8NEP7 349 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 C12orf43Q96C57 262 aaKnown RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 ADI1Q9BV57 179 aa13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF8-203ENST00000417814 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 NBNO60934 754 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 XYLBO75191 536 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CDK14O94921 469 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 ZNF682O95780 498 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 AQP1P29972 269 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 ZNF792Q3KQV3 632 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 PAGE3Q5JUK9 113 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 C11orf74Q86VG3 221 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 PHACTR4Q8IZ21 702 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CCSER2Q9H7U1 834 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 OSER1Q9NX31 292 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 TRIP12Q14669 1992 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 ARVCFO00192 962 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 HS6ST1O60243 411 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CDH2P19022 906 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 FAM189BP81408 668 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 HPCAP84074 193 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 TAF10Q12962 218 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 KCTD8Q6ZWB6 473 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 DET1Q7L5Y6 550 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR52B6Q8NGF0 335 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR2T34Q8NGX1 318 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 BTBD9Q96Q07 612 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 STN1Q9H668 368 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 MYO10Q9HD67 2058 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 MATN3O15232 486 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CHEK2O96017 543 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 HUNKP57058 714 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 RHDQ02161 417 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 TRIM32Q13049 653 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 PPIL2Q13356 520 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 SQLEQ14534 574 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 SPOUT1Q5T280 376 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 PIWIL3Q7Z3Z3 882 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 CLK4Q9HAZ1 481 aaKnown RBP13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 FANCEQ9HB96 536 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 MARCH2Q9P0N8 246 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 INVSQ9Y283 1065 aa13.15□□□□□ -0.3
TNFRSF8-203ENST00000417814 HMOX2P30519 316 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 RENBPP51606 427 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 DUSP4Q13115 394 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 CPSF6Q16630 551 aaKnown RBP eCLIP13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 UNC50Q53HI1 259 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 GLT6D1Q7Z4J2 308 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 ARHGAP12Q8IWW6 846 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 SLC15A3Q8IY34 581 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 MYEOVQ96EZ4 313 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 RASSF1Q9NS23 344 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 DMTF1Q9Y222 760 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 ARPC2O15144 300 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 B3GALT4O96024 378 aa13.14□□□□□ -0.31
TNFRSF8-203ENST00000417814 ZNF26P17031 533 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms