RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 ZRANB3Q5FWF4 1079 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 CRB2Q5IJ48 1285 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 PAPD7Q5XG87 772 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 TRNP1Q6NT89 227 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 RETSATQ6NUM9 610 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 C6orf15Q6UXA7 325 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC47A2Q86VL8 602 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 ZSCAN30Q86W11 494 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 ESX1Q8N693 406 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 LMO3Q8TAP4 145 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 NCSTNQ92542 709 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 C1QTNF7Q9BXJ2 289 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 ULBP3Q9BZM4 244 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 ACTL8Q9H568 366 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 SUFUQ9UMX1 484 aa8.61□□□□□ -1.03
NIF3L1-206ENST00000416651 FAM72CH0Y354 149 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ZNF185O15231 689 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 CUTAO60888 179 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 TMCC1O94876 653 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 LETM1O95202 739 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 GSRP00390 522 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ERBB2P04626 1255 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC2A3P11169 496 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ADCY8P40145 1251 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 MAPK9P45984 424 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 GPR3P46089 330 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 CXCR3P49682 368 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 RNASE9P60153 205 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 PDCLQ13371 301 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 MIIPQ5JXC2 388 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 FAM72AQ5TYM5 149 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 FAM72DQ6L9T8 149 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 FAM72BQ86X60 149 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 PPM1KQ8N3J5 372 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 KIAA1524Q8TCG1 905 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC37A2Q8TED4 501 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ISG20Q96AZ6 181 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 TBCBQ99426 244 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 NPY6RQ99463 290 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 TBC1D10AQ9BXI6 508 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ING2Q9H160 280 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 DNAI1Q9UI46 699 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 PCDHA7Q9UN72 937 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 OSGIN2Q9Y236 505 aa8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 PCDHGA9Q9Y5G4 932 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-206ENST00000416651 ZNF469Q96JG9 3925 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ZGRF1Q86YA3 2104 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 CACNB4O00305 520 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 KIF1CO43896 1103 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 TNFAIP3P21580 790 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 CA5AP35218 305 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 TRIM23P36406 574 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 MMP12P39900 470 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ACTR1BP42025 376 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ACADSBP45954 432 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 RGRP47804 291 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SULT1E1P49888 294 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SEPHS1P49903 392 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 PMS1P54277 932 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ACTR1AP61163 376 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 YWHAEP62258 255 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SNRPD1P62314 119 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 APBA1Q02410 837 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC20A2Q08357 652 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 NFATC2Q13469 925 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 BIRC2Q13490 618 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 MAP7Q14244 749 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 CYTH1Q15438 398 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 CLPPQ16740 277 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 UGP2Q16851 508 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ANO6Q4KMQ2 910 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 RESP18Q5W5W9 173 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 LCN10Q6JVE6 187 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 OLFML1Q6UWY5 402 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 LIPIQ6XZB0 460 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 RFLNAQ6ZTI6 216 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 CAMK1DQ8IU85 385 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 SLC35C1Q96A29 364 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ARHGEF26Q96DR7 871 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 FRMD8Q9BZ67 464 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 NOL6Q9H6R4 1146 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 WDCPQ9H6R7 721 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ZBTB20Q9HC78 741 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 OGFRQ9NZT2 677 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 LHX3Q9UBR4 397 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 NEU3Q9UQ49 428 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
NIF3L1-206ENST00000416651 ACANP16112 2415 aa8.58□□□□□ -1.04
NIF3L1-206ENST00000416651 TGFBR3LH3BV60 316 aa8.58□□□□□ -1.04
NIF3L1-206ENST00000416651 PRICKLE3O43900 615 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-206ENST00000416651 DAB1O75553 588 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms