RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TMEM25Q86YD3 366 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 CNTN4Q8IWV2 1026 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 NPAS3Q8IXF0 933 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 ADGRG2Q8IZP9 1017 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 PQLC1Q8N2U9 271 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 AFAP1L2Q8N4X5 818 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 C12orf76Q8N812 135 aaPredicted RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 KYQ8NBH2 561 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 OSCP1Q8WVF1 389 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 BHMTQ93088 406 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 ISG20Q96AZ6 181 aaKnown RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 CCDC124Q96CT7 223 aaKnown RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 TDRD1Q9BXT4 1180 aaKnown RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 ADGRE3Q9BY15 652 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 SUDS3Q9H7L9 328 aaPredicted RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 COG4Q9H9E3 785 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 LMCD1Q9NZU5 365 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 TLK1Q9UKI8 766 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 HS3ST2Q9Y278 367 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 ACTL7AQ9Y615 435 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 A0A096LPK6 155 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 MROH6A6NGR9 719 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 TXNDC9O14530 226 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ZNF195O14628 629 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 HDAC3O15379 428 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 RNASEH1O60930 286 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 PDE5AO76074 875 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ERVK-10P10266 1014 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 COL6A2P12110 1019 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 TYRP14679 529 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 HLA-FP30511 346 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CD70P32970 193 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 NUMBP49757 651 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 UGP2Q16851 508 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 SEL1L3Q68CR1 1132 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ANKRD54Q6NXT1 300 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CES3Q6UWW8 571 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 LINGO4Q6UY18 593 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 MAVSQ7Z434 540 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 MARVELD2Q8N4S9 558 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 DCLK2Q8N568 766 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ADCY4Q8NFM4 1077 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CALML6Q8TD86 181 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 BRSK1Q8TDC3 778 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 SMARCD2Q92925 531 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ASB16Q96NS5 453 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CEP44Q9C0F1 390 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 NMRAL1Q9HBL8 299 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 C20orf96Q9NUD7 363 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 INTS6Q9UL03 887 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 CLEC4EQ9ULY5 219 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 HOXC11O43248 304 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 TNFAIP8O95379 198 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 GLP2RO95838 553 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ADH1CP00326 375 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 PABPC1P11940 636 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 PEX2P28328 305 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 PPARGP37231 505 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 ARCN1P48444 511 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 ACVR1Q04771 509 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 HYAL1Q12794 435 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 BIRC2Q13490 618 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CYLC2Q14093 348 aaPredicted RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 SEPT6Q14141 434 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CNGA3Q16281 694 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 SFT2D3Q587I9 215 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 LY6G5CQ5SRR4 150 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 LIPMQ5VYY2 423 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 FRMD7Q6ZUT3 714 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 KDELC2Q7Z4H8 507 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 GALNT7Q86SF2 657 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ALDH16A1Q8IZ83 802 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 UNC5BQ8IZJ1 945 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 AHI1Q8N157 1196 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CPSF7Q8N684 471 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 PHC3Q8NDX5 983 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 BPIFB1Q8TDL5 484 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 NAT14Q8WUY8 206 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 FGF13Q92913 245 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 MRPS26Q9BYN8 205 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 LINC00597Q9H2U6 94 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 DUS2Q9NX74 493 aaKnown RBP11.55□□□□□ -0.56
RFFL-205ENST00000415395 SLC25A13Q9UJS0 675 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 FBXO10Q9UK96 956 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 ADAMTS6Q9UKP5 1117 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 CDYLQ9Y232 598 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 RAI2Q9Y5P3 530 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 WNT6Q9Y6F9 365 aa11.55□□□□□ -0.56
RFFL-205ENST00000415395 TTC24A2A3L6 582 aaPredicted RBP11.54□□□□□ -0.56
RFFL-205ENST00000415395 SLC7A4O43246 635 aa11.54□□□□□ -0.56
RFFL-205ENST00000415395 SOCS5O75159 536 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms