RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CCHCR1Q8TD31 782 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.66□□□□□ -0.06
CBX3-203ENST00000409747 SCAMP4Q969E2 229 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 RNF157Q96PX1 679 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 DPYSL5Q9BPU6 564 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PACSIN1Q9BY11 444 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 ADGRE3Q9BY15 652 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 B3GNT4Q9C0J1 378 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 WDR70Q9NW82 654 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 DTLQ9NZJ0 730 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 VPS18Q9P253 973 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 UNC13CQ8NB66 2214 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 C1orf232A0A0U1RR37 186 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 LRRD1A4D1F6 860 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 RGSL1A5PLK6 1076 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 HGSO14964 777 aaPredicted RBP14.66□□□□□ -0.06
CBX3-203ENST00000409747 KDELR1P24390 212 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 ARHGAP25P42331 645 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 OR1D5P58170 312 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PPIDQ08752 370 aaKnown RBP14.66□□□□□ -0.06
CBX3-203ENST00000409747 MESDQ14696 234 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PYCR3Q53H96 274 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 RFLNAQ6ZTI6 216 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 CPNE8Q86YQ8 564 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 RHOT2Q8IXI1 618 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 NAGSQ8N159 534 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 ZNF843Q8N446 348 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PTCD2Q8WV60 388 aaKnown RBP14.66□□□□□ -0.06
CBX3-203ENST00000409747 COX14Q96I36 57 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 RIOK2Q9BVS4 552 aaKnown RBP14.66□□□□□ -0.06
CBX3-203ENST00000409747 RDH14Q9HBH5 336 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 PKD2L2Q9NZM6 624 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 TMEM98Q9Y2Y6 226 aa14.66□□□□□ -0.06
CBX3-203ENST00000409747 B4GAT1O43505 415 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 CLDN7O95471 211 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 ASMTLO95671 621 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 ZFXP17010 805 aaPredicted RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 ITIH1P19827 911 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 IFI35P80217 286 aaPredicted RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 NIPAL4Q0D2K0 466 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 TRA2AQ13595 282 aaKnown RBP eCLIP14.65□□□□□ -0.062e-11■■■■■ 49.5
CBX3-203ENST00000409747 ASTE1Q2TB18 679 aaPredicted RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 SKOR2Q2VWA4 1001 aaPredicted RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 ODF2Q5BJF6 829 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 MARK2Q7KZI7 788 aaKnown RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 TMPRSS9Q7Z410 1059 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 TTC9Q92623 222 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 MLPHQ9BV36 600 aaPredicted RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 MAK16Q9BXY0 300 aaKnown RBP14.65□□□□□ -0.06
CBX3-203ENST00000409747 SEMA6CQ9H3T2 930 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 RMI1Q9H9A7 625 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 PCDHB11Q9Y5F2 797 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 ST14Q9Y5Y6 855 aa14.65□□□□□ -0.06
CBX3-203ENST00000409747 PRAMEF33A0A0G2JMD5 474 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 A0A0U1RQS6 177 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 ANKRD66B4E2M5 251 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 PPP1R12AO14974 1030 aaPredicted RBP14.64□□□□□ -0.07
CBX3-203ENST00000409747 INPP4BO15327 924 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 PRAMEF10O60809 474 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 PRLP01236 227 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 JCHAINP01591 159 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 CD86P42081 329 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 FASLGP48023 281 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 SPINT3P49223 89 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 MAPK10P53779 464 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 GPLD1P80108 840 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 SLC10A2Q12908 348 aaPredicted RBP14.64□□□□□ -0.07
CBX3-203ENST00000409747 IHHQ14623 411 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 PDK1Q15118 436 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 ZNF605Q86T29 641 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 TRIM74Q86UV6 250 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 CCDC112Q8NEF3 446 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 OR4D9Q8NGE8 314 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 SLC35G2Q8TBE7 412 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 PATE1Q8WXA2 126 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 RAPGEF5Q92565 580 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 CCDC42Q96M95 316 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 SMIM14Q96QK8 99 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 NUDT22Q9BRQ3 303 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 ZMYND15Q9H091 742 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 FAM83DQ9H4H8 585 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 STN1Q9H668 368 aaKnown RBP14.64□□□□□ -0.07
CBX3-203ENST00000409747 ABHD10Q9NUJ1 306 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 KCNK4Q9NYG8 393 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 HEY1Q9Y5J3 304 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 CFAP46Q8IYW2 2715 aa14.64□□□□□ -0.07
CBX3-203ENST00000409747 KCNK1O00180 336 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 APOL1O14791 398 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 SLC2A4P14672 509 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 CD1CP29017 333 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 AP1B1Q10567 949 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 SQSTM1Q13501 440 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 C16orf72Q14CZ0 275 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 HENMT1Q5T8I9 393 aaKnown RBP14.63□□□□□ -0.07
CBX3-203ENST00000409747 SLC9A4Q6AI14 798 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 USP53Q70EK8 1073 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 PLD5Q8N7P1 536 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 USP7Q93009 1102 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 AGAP2Q99490 1192 aa14.63□□□□□ -0.07
CBX3-203ENST00000409747 BRD8Q9H0E9 1235 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms