RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MGAT3Q09327 533 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 GALNT1Q10472 559 aaPredicted RBP15.42■□□□□ 0.06
LIMS2-205ENST00000409455 CAPRIN1Q14444 709 aaKnown RBP15.42■□□□□ 0.06
LIMS2-205ENST00000409455 VPS26BQ4G0F5 336 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 CLEC6AQ6EIG7 209 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 XAF1Q6GPH4 301 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 LINC00523Q86TU6 105 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 TBC1D21Q8IYX1 336 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 CADM3Q8N126 398 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 TTC30BQ8N4P2 665 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 ZFP42Q96MM3 310 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 MAGEE1Q9HCI5 957 aa15.42■□□□□ 0.06
LIMS2-205ENST00000409455 KCNE1P15382 129 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ERCC2P18074 760 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 TKTL1P51854 596 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 SOX4Q06945 474 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-205ENST00000409455 TECRLQ5HYJ1 363 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 AGAP9Q5VTM2 703 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 RNF135Q8IUD6 432 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ZNF784Q8NCA9 323 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PDZD8Q8NEN9 1154 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ERLEC1Q96DZ1 483 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PHF21BQ96EK2 531 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 LPIN3Q9BQK8 851 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 MUC13Q9H3R2 512 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 CMTM6Q9NX76 183 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ANAPC2Q9UJX6 822 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 SCN1AP35498 2009 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PFDN6O15212 129 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ALDOCP09972 364 aaKnown RBP15.41■□□□□ 0.06
LIMS2-205ENST00000409455 KCNA5P22460 613 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PLA2G16P53816 162 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 RAD23AP54725 363 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 POU4F1Q01851 419 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 SPATS1Q496A3 300 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 THOC7Q6I9Y2 204 aaKnown RBP15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PKN3Q6P5Z2 889 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 BTLAQ7Z6A9 289 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 FAM35AQ86V20 835 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PIGZQ86VD9 579 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 LRRC52Q8N7C0 313 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ZNF296Q8WUU4 475 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-205ENST00000409455 OSCP1Q8WVF1 389 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 MUS81Q96NY9 551 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 CSF3RQ99062 836 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 VAT1Q99536 393 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 KLHL25Q9H0H3 589 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 DPEP3Q9H4B8 488 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 IGSF5Q9NSI5 407 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 NME7Q9Y5B8 376 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 ST14Q9Y5Y6 855 aa15.41■□□□□ 0.06
LIMS2-205ENST00000409455 PIRO00625 290 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 CD4P01730 458 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 INHAP05111 366 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 MTHFD1P11586 935 aaKnown RBP15.4■□□□□ 0.06
LIMS2-205ENST00000409455 SLC6A2P23975 617 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 NFKBIAP25963 317 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 SLC1A2P43004 574 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 PCID2Q5JVF3 399 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 GTF2IRD2BQ6EKJ0 949 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 GTF2IRD2Q86UP8 949 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 UNC93AQ86WB7 457 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 SLC22A9Q8IVM8 553 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 MIER2Q8N344 545 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 CGREF1Q99674 301 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 TRMOQ9BU70 441 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 ADNPQ9H2P0 1102 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 FAM105AQ9NUU6 356 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 TMEM98Q9Y2Y6 226 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 DGKBQ9Y6T7 804 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
LIMS2-205ENST00000409455 M0QYT0 321 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 FXYD1O00168 92 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 PTGESO14684 152 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 CPB1P15086 417 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 CAPN3P20807 821 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 GSTM2P28161 218 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 AFF1P51825 1210 aaKnown RBP15.4■□□□□ 0.06
LIMS2-205ENST00000409455 TPI1P60174 286 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 PITX1P78337 314 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-205ENST00000409455 FBXO47Q5MNV8 452 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 AGAP7PQ5VUJ5 663 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 LHX8Q68G74 356 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 CRTC3Q6UUV7 619 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 PARP8Q8N3A8 854 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 S100ZQ8WXG8 99 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 LRRC58Q96CX6 371 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 BDH2Q9BUT1 245 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 ALG2Q9H553 416 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 PADI3Q9ULW8 664 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 NOD1Q9Y239 953 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 VWA7Q9Y334 891 aa15.4■□□□□ 0.06
LIMS2-205ENST00000409455 GPR182O15218 404 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 DAB1O75553 588 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 GNRH1P01148 92 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 UMPSP11172 480 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 CD52P31358 61 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 GSSP48637 474 aa15.39■□□□□ 0.05
LIMS2-205ENST00000409455 RPL34P49207 117 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms