RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 FOXN2P32314 431 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 PPARGP37231 505 aaPredicted RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 RAB10P61026 200 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 CACNG1Q06432 222 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 ELAVL3Q14576 367 aaKnown RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 NAIF1Q69YI7 327 aaPredicted RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 CNSTQ6PJW8 725 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 CMC1Q7Z7K0 106 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 DSG4Q86SJ6 1040 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 CBARPQ8N350 705 aaPredicted RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 TTC1Q99614 292 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 TMEM245Q9H330 911 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 FBRSL1Q9HCM7 1045 aaKnown RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 BPIFA1Q9NP55 256 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 SLC17A7Q9P2U7 560 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 THAP10Q9P2Z0 257 aaPredicted RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 UPK3BL1B0FP48 263 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 UPK3BL2E5RIL1 263 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 C2P06681 752 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 DHRS4L1P0CG22 281 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 COL6A2P12110 1019 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 ETV4P43268 484 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 RPS9P46781 194 aaKnown RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 PDK4Q16654 411 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 FAM45BPQ6NSW5 357 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 CRTC1Q6UUV9 634 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 CERS6Q6ZMG9 384 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 SLC41A1Q8IVJ1 513 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 TMIEQ8NEW7 156 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 FAM45AQ8TCE6 357 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 STARD13Q9Y3M8 1113 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 A0A087X1B8 175 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 NDUFS3O75489 264 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 CLDN7O95471 211 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 F7P08709 466 aaPredicted RBP20.92■□□□□ 0.94
TPM1-208ENST00000404484 VIPR1P32241 457 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 TNFRSF4P43489 277 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 CSRP3P50461 194 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 GALK1P51570 392 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 ARHGEF7Q14155 803 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 PTPRRQ15256 657 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 ZKSCAN8Q15776 578 aaPredicted RBP20.92■□□□□ 0.94
TPM1-208ENST00000404484 DBN1Q16643 649 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 ZRANB3Q5FWF4 1079 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 LRRC66Q68CR7 880 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 RGS9BPQ6ZS82 235 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 CDHR3Q6ZTQ4 885 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 STK40Q8N2I9 435 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 NSRP1Q9H0G5 558 aaKnown RBP20.92■□□□□ 0.94
TPM1-208ENST00000404484 CAB39LQ9H9S4 337 aa20.92■□□□□ 0.94
TPM1-208ENST00000404484 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.92■□□□□ 0.94
TPM1-208ENST00000404484 H0Y858 1186 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 CTSLP07711 333 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 ITGALP20701 1170 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 SAT1P21673 171 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 SPAM1P38567 509 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 XIAPP98170 497 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 PEX6Q13608 980 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 CCDC153Q494R4 210 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 TMEM196Q5HYL7 178 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 C9orf64Q5T6V5 341 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 LYPLAL1Q5VWZ2 237 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 C1orf210Q8IVY1 113 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 TRIM42Q8IWZ5 723 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 ZNF366Q8N895 744 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 LRRC8CQ8TDW0 803 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 EID2BQ96D98 161 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 PPP1R16AQ96I34 528 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 OMDQ99983 421 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 P2RY13Q9BPV8 354 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 CCDC68Q9H2F9 335 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 MTG2Q9H4K7 406 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 RAD18Q9NS91 495 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 B4GALT6Q9UBX8 382 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 ACOT9Q9Y305 439 aa20.91■□□□□ 0.94
TPM1-208ENST00000404484 FAM107AO95990 144 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 VIMP08670 466 aaKnown RBP20.9■□□□□ 0.94
TPM1-208ENST00000404484 HNRNPLP14866 589 aaKnown RBP eCLIP20.9■□□□□ 0.941e-7■■□□□ 12.2
TPM1-208ENST00000404484 SERPINB4P48594 390 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 SUOXP51687 545 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 KPNA2P52292 529 aaKnown RBP20.9■□□□□ 0.94
TPM1-208ENST00000404484 CCINQ13939 588 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 SEMA3AQ14563 771 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 ZNF789Q5FWF6 425 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 PPM1JQ5JR12 505 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 HECTD2Q5U5R9 776 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 ERAP2Q6P179 960 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 CLEC14AQ86T13 490 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 LDB1Q86U70 411 aaPredicted RBP20.9■□□□□ 0.94
TPM1-208ENST00000404484 BCAS4Q8TDM0 211 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 ZNF317Q96PQ6 595 aaPredicted RBP20.9■□□□□ 0.94
TPM1-208ENST00000404484 PKD2L2Q9NZM6 624 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 MID2Q9UJV3 735 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 VWA7Q9Y334 891 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 COMMD10Q9Y6G5 202 aa20.9■□□□□ 0.94
TPM1-208ENST00000404484 GLYATL1P3A0A0U1RQE8 302 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 C16orf96A6NNT2 1141 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 C1QTNF3-AMACRE9PGA6 284 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 KPNA3O00505 521 aaPredicted RBP20.89■□□□□ 0.94
TPM1-208ENST00000404484 SRP72O76094 671 aaKnown RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms