RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TNFRSF13BO14836 293 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 LCATP04180 440 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 IRF1P10914 325 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ETFAP13804 333 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 GNLYP22749 145 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 SHMT1P34896 483 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 BSGP35613 385 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 FRG1Q14331 258 aaKnown RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 HNF4GQ14541 408 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 SGO1Q5FBB7 561 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 TTI2Q6NXR4 508 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 LCTLQ6UWM7 567 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 C4orf50Q6ZRC1 276 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PALB2Q86YC2 1186 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLC35F3Q8IY50 421 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 MB21D2Q8IYB1 491 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ADSSL1Q8N142 457 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZCCHC9Q8N567 271 aaKnown RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 MIGA1Q8NAN2 632 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 TMEM116Q8NCL8 245 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARRDC2Q8TBH0 407 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ASB5Q8WWX0 329 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PSPC1Q8WXF1 523 aaKnown RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 FRAT1Q92837 279 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 SNAPC3Q92966 411 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 VCPIP1Q96JH7 1222 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 FAM234AQ9H0X4 552 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 CHMP4BQ9H444 224 aaKnown RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 CATSPERBQ9H7T0 1116 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 POLR1BQ9H9Y6 1135 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 KIF9Q9HAQ2 790 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PLEKHA5Q9HAU0 1116 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PLAC1Q9HBJ0 212 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 CYSLTR2Q9NS75 346 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PLK2Q9NYY3 685 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 LIMA1Q9UHB6 759 aaKnown RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 SQORQ9Y6N5 450 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ABCC4O15439 1325 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 ATP10DQ9P241 1426 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 FAM237BA0A1B0GVD1 139 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 A0A1B0GVT2 93 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 A0A1W2PQF6 199 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 USP17L23D6RBM5 183 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 MS4A18H0YCH9 400 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 TAF4O00268 1085 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 TCERG1O14776 1098 aaKnown RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 SEC14L5O43304 696 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 DOK2O60496 412 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 RNASEH2AO75792 299 aaKnown RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 LAMP2P13473 410 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 TBXAS1P24557 533 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 NFKBIAP25963 317 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 PIGAP37287 484 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 PIP4K2AP48426 406 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ENTPD1P49961 510 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 EIF5P55010 431 aaKnown RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZP1P60852 638 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 SCN7AQ01118 1682 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ITPK1Q13572 414 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 MVPQ14764 893 aaKnown RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 WDR78Q5VTH9 848 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 NEK10Q6ZWH5 1172 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 G2E3Q7L622 706 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 CASZ1Q86V15 1759 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ERGIC1Q969X5 290 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 CLK4Q9HAZ1 481 aaKnown RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 MAGEE1Q9HCI5 957 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 BPIFA1Q9NP55 256 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 SMYD2Q9NRG4 433 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 DIAPH3Q9NSV4 1193 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 HAO1Q9UJM8 370 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 CORO1CQ9ULV4 474 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 DDX19BQ9UMR2 479 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ADAM18Q9Y3Q7 739 aa5.1□□□□□ -1.59
HMGB3P19-201ENST00000403971 ADCY9O60503 1353 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 EIF3CLB5ME19 914 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 J3KR12 359 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 RGS14O43566 566 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 PAGE4O60829 102 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 PTP4A3O75365 173 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 MLYCDO95822 493 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 IL7RP16871 459 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 AGAP20933 346 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 PSMA4P25789 261 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CDAP32320 146 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARL3P36405 182 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CRKLP46109 303 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 ITGADQ13349 1161 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CTTNQ14247 550 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CCNG2Q16589 344 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 TCTN1Q2MV58 587 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 C20orf194Q5TEA3 1177 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 QSOX2Q6ZRP7 698 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 MON1BQ7L1V2 547 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 COPS6Q7L5N1 327 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 PATL1Q86TB9 770 aaKnown RBP5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 HAPLN4Q86UW8 402 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
HMGB3P19-201ENST00000403971 CCDC105Q8IYK2 499 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms