RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 CDC26Q8NHZ8 85 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 FAM45AQ8TCE6 357 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 GRIN3AQ8TCU5 1115 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CANT1Q8WVQ1 401 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CYGBQ8WWM9 190 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 LINGO1Q96FE5 620 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SLC39A13Q96H72 371 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CDKN2AIPNLQ96HQ2 116 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 NSMCE3Q96MG7 304 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 UROC1Q96N76 676 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 EGFL8Q99944 293 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TMEM79Q9BSE2 394 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CCDC28BQ9BUN5 200 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 GPR63Q9BZJ6 419 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 Q9H521 79 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SOX17Q9H6I2 414 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 POLR3BQ9NW08 1133 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 EVLQ9UI08 416 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 VPS28Q9UK41 221 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 AGO1Q9UL18 857 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ASB1Q9Y576 335 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 DNAJC15Q9Y5T4 150 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TRPM7Q96QT4 1865 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CDH23Q9H251 3354 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SLC7A4O43246 635 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SH3BGRLO75368 114 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ECI2O75521 394 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 OR4F21O95013 312 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CLPTM1O96005 669 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CD1DP15813 335 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ZNF37AP17032 561 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 GJA1P17302 382 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 MZF1P28698 734 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 PRDX6P30041 224 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ATP5C1P36542 298 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 SLC11A2P49281 568 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 NRG1Q02297 640 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 RAD51Q06609 339 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SREBF2Q12772 1141 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 PPP1R8Q12972 351 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 MILR1Q7Z6M3 343 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 LCA5Q86VQ0 697 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 RETREG3Q86VR2 466 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 DHFR2Q86XF0 187 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CNTN4Q8IWV2 1026 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TRIML2Q8N7C3 387 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 FNDC5Q8NAU1 212 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CLHC1Q8NHS4 586 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 BCL7CQ8WUZ0 217 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 EEF1AKMT1Q8WVE0 214 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 NR1H4Q96RI1 486 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 MCMBPQ9BTE3 642 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 HGH1Q9BTY7 390 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 UPF3AQ9H1J1 476 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 MFSD1Q9H3U5 465 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 LIN28AQ9H9Z2 209 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 SPAG4Q9NPE6 437 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TAS2R13Q9NYV9 303 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TRMT6Q9UJA5 497 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 RAI2Q9Y5P3 530 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 GREB1Q4ZG55 1949 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 KRT87PA6NCN2 255 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 C2orf81A6NN90 581 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 PRRG1O14668 218 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 CLGNO14967 610 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 INSIG1O15503 277 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 CA12O43570 354 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 ACSL4O60488 711 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 PRAMEF11O60813 436 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 TBL1XO60907 577 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 NDST3O95803 873 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 C1RP00736 705 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 FGF1P05230 155 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 MBL2P11226 248 aaPredicted RBP4.34□□□□□ -1.72
SMC6-203ENST00000402989 ATF6P18850 670 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 CAPN3P20807 821 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 IMPDH1P20839 514 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 HOXC13P31276 330 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 GDF5P43026 501 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 RHOAP61586 193 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 HERVK_113P63132 956 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 CLCQ05315 142 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 IL10RBQ08334 325 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 TRIM25Q14258 630 aaKnown RBP4.34□□□□□ -1.72
SMC6-203ENST00000402989 MAPRE2Q15555 327 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 GSTA3Q16772 222 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 ZIK1Q3SY52 487 aaPredicted RBP4.34□□□□□ -1.72
SMC6-203ENST00000402989 SLC44A4Q53GD3 710 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 C6orf10Q5SRN2 563 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 OTUD3Q5T2D3 398 aaPredicted RBP4.34□□□□□ -1.72
SMC6-203ENST00000402989 PTRHD1Q6GMV3 140 aaKnown RBP4.34□□□□□ -1.72
SMC6-203ENST00000402989 ZBTB49Q6ZSB9 765 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 KIAA0408Q6ZU52 694 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 LRRC8DQ7L1W4 858 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 SLC22A9Q8IVM8 553 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 OFCC1Q8IZS5 231 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 MIER2Q8N344 545 aa4.34□□□□□ -1.72
SMC6-203ENST00000402989 ARHGAP18Q8N392 663 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms