RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 EIF2B5Q13144 721 aaKnown RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 GALNTL6Q49A17 601 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 DNAL1Q4LDG9 190 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF805Q5CZA5 627 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 DPY19L3Q6ZPD9 716 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 LDB1Q86U70 411 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 RAB7BQ96AH8 199 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ABCG8Q9H221 673 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CACNA2D2Q9NY47 1150 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 RFXAPO00287 272 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 VPS4BO75351 444 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PGLSO95336 258 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 STK19P49842 368 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TEAD4Q15561 434 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 DUSP6Q16828 381 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 GAREM2Q75VX8 874 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KBTBD6Q86V97 674 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 BCL7CQ8WUZ0 217 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CENPTQ96BT3 561 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 GPR21Q99679 349 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 HEY2Q9UBP5 337 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ALOX15P16050 662 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CD70P32970 193 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SKP1P63208 163 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 HTRA4P83105 476 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 FSTL4Q6MZW2 842 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ANKRD54Q6NXT1 300 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 RSPO2Q6UXX9 243 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 UBE2R2Q712K3 238 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TCAIMQ8N3R3 496 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SLC26A7Q8TE54 656 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 HLA-CQ95604 372 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF446Q9NWS9 450 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KCNE2Q9Y6J6 123 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 LOC285556D6RIA3 1793 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KANSL1LA0AUZ9 987 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 MGAT4DA6NG13 374 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 OR2AG2A6NM03 316 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 LEFTY1O75610 366 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KLF8O95600 359 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PRKCGP05129 697 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CRHR1P34998 444 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 BLKP51451 505 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SKOR1P84550 965 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ATP6AP1LQ52LC2 224 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TRMT10BQ6PF06 316 aaKnown RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KLHL35Q6PF15 583 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF852Q6ZMS4 543 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 APCDD1Q8J025 514 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PEX13Q92968 403 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 NT5C3BQ969T7 300 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PRICKLE1Q96MT3 831 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 WDR26Q9H7D7 661 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 FBRSQ9HAH7 460 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 MRM3Q9HC36 420 aaKnown RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 OSER1Q9NX31 292 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SLCO3A1Q9UIG8 710 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 IRAK3Q9Y616 596 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TRPM7Q96QT4 1865 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 GNG14A0A1W2PPG7 69 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 A0A1W2PPM1 405 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 C16orf96A6NNT2 1141 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 IGFBP6P24592 240 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 SUOXP51687 545 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CCDC157Q569K6 752 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 LIPMQ5VYY2 423 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 C16orf89Q6UX73 402 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ZCCHC23Q6ZST2 131 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 C11orf96Q7Z7L8 435 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 DENND6AQ8IWF6 608 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KRT78Q8N1N4 520 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ITFG1Q8TB96 612 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 CKAP2Q8WWK9 683 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 RMDN2Q96LZ7 410 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TRMOQ9BU70 441 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 KIFC1Q9BW19 673 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 PARVBQ9HBI1 364 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TCF7L2Q9NQB0 619 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 LGALS13Q9UHV8 139 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 RRP15Q9Y3B9 282 aaKnown RBP8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TEX264Q9Y6I9 313 aa8.24□□□□□ -1.09
PTPRD-204ENST00000397606 TCRBV5S1A1TA0A578 114 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 CFAP73A6NFT4 308 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 FAM155BO75949 473 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 CLDN7O95471 211 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SLC1A2P43004 574 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RPL14P50914 215 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 PTPN5P54829 565 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ITIH4Q14624 930 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 C1orf146Q5VVC0 180 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 LRRC66Q68CR7 880 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TRNP1Q6NT89 227 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ERN2Q76MJ5 926 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms