RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LIPIQ6XZB0 460 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 KLHL7Q8IXQ5 586 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 FSTL5Q8N475 847 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-202ENST00000396828 ARL14Q8N4G2 192 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 MMGT1Q8N4V1 131 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 Q8N9G6 341 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-202ENST00000396828 GPR156Q8NFN8 814 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 HCAR2Q8TDS4 363 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
NEDD8-202ENST00000396828 UBXN4Q92575 508 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 GLMNQ92990 594 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
NEDD8-202ENST00000396828 GRAMD1AQ96CP6 724 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 ECHDC3Q96DC8 303 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 RBM15Q96T37 977 aaKnown RBP eCLIP10.34□□□□□ -0.758e-6■□□□□ 8.4
NEDD8-202ENST00000396828 C1QTNF7Q9BXJ2 289 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 TMEM168Q9H0V1 697 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 KLQ9UEF7 1012 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 ATP8A1Q9Y2Q0 1164 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 RELNP78509 3460 aa10.34□□□□□ -0.75
NEDD8-202ENST00000396828 ARHGEF17Q96PE2 2063 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-202ENST00000396828 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 D6RAR5 112 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 TRAFD1O14545 582 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 TOR1BO14657 336 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 PLD2O14939 933 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 RASGRP1O95267 797 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 TNFP01375 233 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ITGA2BP08514 1039 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ALPIP09923 528 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ERCC2P18074 760 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ITIH1P19827 911 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 AMPD1P23109 780 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 SLC5A2P31639 672 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 SERPINB6P35237 376 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ETV5P41161 510 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 FNTAP49354 379 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 BLKP51451 505 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 SUOXP51687 545 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 NDST2P52849 883 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 OTUD4Q01804 1114 aaKnown RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ADCY2Q08462 1091 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 SLC10A7Q0GE19 358 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 MTM1Q13496 603 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 SIX1Q15475 284 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 CYP1B1Q16678 543 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 GLE1Q53GS7 698 aaKnown RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 C8orf74Q6P047 294 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 CCDC137Q6PK04 289 aaKnown RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 LVRNQ6Q4G3 990 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 RAB11FIP2Q7L804 512 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 MAATS1Q7Z4T9 603 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 FBXO39Q8N4B4 442 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 PQLC3Q8N755 202 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 PLD5Q8N7P1 536 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 PRELID2Q8N945 189 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 FAM46DQ8NEK8 389 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 GRK7Q8WTQ7 553 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 C1orf54Q8WWF1 131 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 HAUS1Q96CS2 278 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 LIN37Q96GY3 246 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 WDR92Q96MX6 357 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ZNF641Q96N77 438 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 GFM1Q96RP9 751 aaKnown RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 KRT12Q99456 494 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 HERPUD2Q9BSE4 406 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 LRRN3Q9H3W5 708 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 HEY1Q9Y5J3 304 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 ST14Q9Y5Y6 855 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 DGKBQ9Y6T7 804 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 RNF215Q9Y6U7 377 aa10.33□□□□□ -0.76
NEDD8-202ENST00000396828 UBR5O95071 2799 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-202ENST00000396828 FLNCQ14315 2725 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 HECTD1Q9ULT8 2610 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 CYSRT1A8MQ03 144 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 DFFAO00273 331 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 LIASO43766 372 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ZNF189O75820 626 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 PEX11BO96011 259 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 HTR1BP28222 390 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 TRIM23P36406 574 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 COILP38432 576 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 CSNK1DP48730 415 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 INHBCP55103 352 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 EIF3EP60228 445 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 DR1Q01658 176 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 SNX1Q13596 522 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 DHX34Q14147 1143 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 PAFAH1B3Q15102 231 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 NOMO1Q15155 1222 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 TEX35Q5T0J7 233 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 CERCAMQ5T4B2 595 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 CFAP58Q5T655 872 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 NCBP2-AS2Q69YL0 99 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ERAP2Q6P179 960 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 DRICH1Q6PGQ1 229 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 OGFOD3Q6PK18 319 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 CCDC81Q6ZN84 652 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms