RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PISDQ9UG56 409 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 TTLL3Q9Y4R7 772 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 MGAQ8IWI9 3026 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 TMEM253P0C7T8 217 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 LIPCP11150 499 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 ZFXP17010 805 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-202ENST00000381208 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 GJC1P36383 396 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 ACTR1BP42025 376 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 ACTR1AP61163 376 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 GPLD1P80108 840 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 FOXK1P85037 733 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 SQSTM1Q13501 440 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 ATP13A4Q4VNC1 1196 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 PHF19Q5T6S3 580 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 SLC30A9Q6PML9 568 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 CCNYQ8ND76 341 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-202ENST00000381208 RNF157Q96PX1 679 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 DNAJC7Q99615 494 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 MAK16Q9BXY0 300 aaKnown RBP12.92□□□□□ -0.34
RPAIN-202ENST00000381208 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
RPAIN-202ENST00000381208 BRD8Q9H0E9 1235 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 STN1Q9H668 368 aaKnown RBP12.92□□□□□ -0.34
RPAIN-202ENST00000381208 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 RAD18Q9NS91 495 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 PKD2L2Q9NZM6 624 aa12.92□□□□□ -0.34
RPAIN-202ENST00000381208 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 B4GAT1O43505 415 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 AKR1B10O60218 316 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 ECEL1O95672 775 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 SOD1P00441 154 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 FUCA1P04066 466 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 SLC2A4P14672 509 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 KDELR1P24390 212 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 AK4P27144 223 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 FASLGP48023 281 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 MAZP56270 477 aaKnown RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 DSC2Q02487 901 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 PDK1Q15118 436 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 AMZ1Q400G9 498 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 PYCR3Q53H96 274 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 LRRC38Q5VT99 294 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 ZNF605Q86T29 641 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 PQLC3Q8N755 202 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 OR4D9Q8NGE8 314 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 ARRDC2Q8TBH0 407 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 COX14Q96I36 57 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-202ENST00000381208 DTLQ9NZJ0 730 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 CHKBQ9Y259 395 aa12.91□□□□□ -0.34
RPAIN-202ENST00000381208 KALRNO60229 2985 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 PMS2P1A4D2B8 440 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 GPR89AB7ZAQ6 455 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 CASC3O15234 703 aaKnown RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 C1QL1O75973 258 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ASMTLO95671 621 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 PRLP01236 227 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 GPR89BP0CG08 455 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 HGFP14210 728 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 SLC1A1P43005 524 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 OR1D5P58170 312 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 TAS2R40P59535 323 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 GBE1Q04446 702 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 SLC14A2Q15849 920 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 BZW1Q7L1Q6 419 aaKnown RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 NAGSQ8N159 534 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ZNF843Q8N446 348 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 ZSCAN1Q8NBB4 408 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 AGBL5Q8NDL9 886 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 LPCAT1Q8NF37 534 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 TTC9Q92623 222 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 SCAMP4Q969E2 229 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 SH3KBP1Q96B97 665 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 CCDC42Q96M95 316 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 RIOK2Q9BVS4 552 aaKnown RBP12.9□□□□□ -0.34
RPAIN-202ENST00000381208 FAM83DQ9H4H8 585 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 CD84Q9UIB8 345 aa12.9□□□□□ -0.34
RPAIN-202ENST00000381208 SPTA1P02549 2419 aa12.89□□□□□ -0.35
RPAIN-202ENST00000381208 LRRD1A4D1F6 860 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms