RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 DCBLD1Q8N8Z6 715 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 RP9Q8TA86 221 aaKnown RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 RIN3Q8TB24 985 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 TDP1Q9NUW8 608 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 BACE2Q9Y5Z0 518 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 NEMP2A6NFY4 417 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 ESR1P03372 595 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 PTGER3P43115 390 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 CDC16Q13042 620 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 PLEKHG4Q58EX7 1191 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 KIAA1324Q6UXG2 1013 aaKnown RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 IZUMO2Q6UXV1 221 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 EFCAB3Q8N7B9 438 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 MAGEC3Q8TD91 643 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 AP2M1Q96CW1 435 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 C1orf50Q9BV19 199 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
TCOF1-202ENST00000377797 KCTD5Q9NXV2 234 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 KCTD3Q9Y597 815 aa14.46□□□□□ -0.09
TCOF1-202ENST00000377797 PER2O15055 1255 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF23P17027 643 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 S100A3P33764 101 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 KLF10Q13118 480 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 TSNQ15631 228 aaKnown RBP14.46□□□□□ -0.1
TCOF1-202ENST00000377797 TRNP1Q6NT89 227 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 PRMT9Q6P2P2 845 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 UBE2R2Q712K3 238 aaPredicted RBP14.46□□□□□ -0.1
TCOF1-202ENST00000377797 SCD5Q86SK9 330 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 ASZ1Q8WWH4 475 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 NSMCE2Q96MF7 247 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 MYOCQ99972 504 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 RNPEPL1Q9HAU8 725 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 TLR9Q9NR96 1032 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 SNX6Q9UNH7 406 aa14.46□□□□□ -0.1
TCOF1-202ENST00000377797 TEX28O15482 410 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 PRNPP04156 253 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 TCEA2Q15560 299 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ZDHHC20Q5W0Z9 365 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 PAQR9Q6ZVX9 377 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 CENPLQ8N0S6 344 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 AGAP11Q8TF27 550 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 OVCA2Q8WZ82 227 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ADNPQ9H2P0 1102 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 COPS7BQ9H9Q2 264 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 AHSPQ9NZD4 102 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 MYO7AQ13402 2215 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 THOP1P52888 689 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SLC18A2Q05940 514 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 CAPRIN2Q6IMN6 1127 aaKnown RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 TMEM154Q6P9G4 183 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 PYDC1Q8WXC3 89 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SEPHS2Q99611 448 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SLC7A5P2Q9GIP4 190 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SMG9Q9H0W8 520 aaKnown RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ANKRD66B4E2M5 251 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ALPIP09923 528 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 TBCELQ5QJ74 424 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 FBXO46Q6PJ61 603 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ZSCAN18Q8TBC5 510 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 KCNN1Q92952 543 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 PGAP3Q96FM1 320 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 KIFC1Q9BW19 673 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF711Q9Y462 761 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 UBXN8O00124 270 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 WDR47O94967 919 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 CDH2P19022 906 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 IL4RP24394 825 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ALDH9A1P49189 494 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 RPL38P63173 70 aaKnown RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 MRPS22P82650 360 aaKnown RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 CRTC3Q6UUV7 619 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SYT12Q8IV01 421 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 CPA6Q8N4T0 437 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 SLC22A17Q8WUG5 538 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 PPP3R2Q96LZ3 170 aa14.45□□□□□ -0.1
TCOF1-202ENST00000377797 WRAP53Q9BUR4 548 aaKnown RBP14.45□□□□□ -0.1
TCOF1-202ENST00000377797 ECT2LQ008S8 904 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 MPP2Q14168 576 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 CLEC6AQ6EIG7 209 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 HORMAD1Q86X24 394 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 RAVER1Q8IY67 606 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF555Q8NEP9 628 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 SYNDIG1Q9H7V2 258 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 INTS10Q9NVR2 710 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 KDELR3O43731 214 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 MAFKO60675 156 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 SIN3BO75182 1162 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 PSME3P61289 254 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 PRKG2Q13237 762 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 LACTB2Q53H82 288 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 GRASPQ7Z6J2 395 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 OR2AP1Q8NGE2 309 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 DIS3LQ8TF46 1054 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 LZICQ8WZA0 190 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ESAMQ96AP7 390 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms