RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 B8ZZF3 427 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 MYO1FO00160 1098 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 MATN3O15232 486 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.31
RPF1-201ENST00000370654 MMP2P08253 660 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 UBASH3AP57075 661 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 NFKB2Q00653 900 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 RALGPS1Q5JS13 557 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 BBS5Q8N3I7 341 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.31
RPF1-201ENST00000370654 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 RAPGEF5Q92565 580 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 EID2BQ96D98 161 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 OR2M4Q96R27 311 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 POLR1EQ9GZS1 481 aaKnown RBP13.08□□□□□ -0.31
RPF1-201ENST00000370654 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.31
RPF1-201ENST00000370654 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.31
RPF1-201ENST00000370654 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.31
RPF1-201ENST00000370654 PIEZO2Q9H5I5 2752 aa13.08□□□□□ -0.32
RPF1-201ENST00000370654 CAPN8A6NHC0 703 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 FADS2P1A8MWK0 482 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 J3QKU1 62 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 DNAJC6O75061 913 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 PROSCO94903 275 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 CASP14P31944 242 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 LIMK2P53671 638 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 ZNF648Q5T619 568 aaPredicted RBP13.07□□□□□ -0.32
RPF1-201ENST00000370654 B4GALNT4Q76KP1 1039 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 TSGA13Q96PP4 275 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 OCIAD1Q9NX40 245 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 DTLQ9NZJ0 730 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 BSNQ9UPA5 3926 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 TENM4Q6N022 2769 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 FAM87AP0C7U9 286 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 ITGB6P18564 788 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 CCNCP24863 283 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 ZBTB17Q13105 803 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 IFI16Q16666 785 aaKnown RBP13.07□□□□□ -0.32
RPF1-201ENST00000370654 QPCTQ16769 361 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
RPF1-201ENST00000370654 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 CEP41Q9BYV8 373 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 B3GALT1Q9Y5Z6 326 aa13.07□□□□□ -0.32
RPF1-201ENST00000370654 ZFC3H1O60293 1989 aaKnown RBP13.06□□□□□ -0.32
RPF1-201ENST00000370654 CYSRT1A8MQ03 144 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 KCNK1O00180 336 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 JCHAINP01591 159 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 THRAP10827 490 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 CD86P42081 329 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 GPR3P46089 330 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 EPHB1P54762 984 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 SQSTM1Q13501 440 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 CLCA4Q14CN2 919 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 TBR1Q16650 682 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
RPF1-201ENST00000370654 ZNF765Q7L2R6 523 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 NLRP8Q86W28 1048 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 SFRP1Q8N474 314 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 ART4Q93070 314 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 NKD1Q969G9 470 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 ZNF670Q9BS34 389 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 CDH19Q9H159 772 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 KCNK4Q9NYG8 393 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 TBC1D29Q9UFV1 150 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 ZNHIT2Q9UHR6 403 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 KCNK6Q9Y257 313 aa13.06□□□□□ -0.32
RPF1-201ENST00000370654 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
RPF1-201ENST00000370654 C1orf232A0A0U1RR37 186 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 A6NCN8 305 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
RPF1-201ENST00000370654 A8MU76 341 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 HGSO14964 777 aaPredicted RBP13.05□□□□□ -0.32
RPF1-201ENST00000370654 ASMTLO95671 621 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 PIRTP0C851 137 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 ZNF30P17039 623 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 KDELR1P24390 212 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 NFKBIAP25963 317 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 SPINT3P49223 89 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 GALNT3Q14435 633 aa13.05□□□□□ -0.32
RPF1-201ENST00000370654 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.05□□□□□ -0.32
RPF1-201ENST00000370654 HENMT1Q5T8I9 393 aaKnown RBP13.05□□□□□ -0.32
RPF1-201ENST00000370654 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms