RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GTF2A1LQ9UNN4 478 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 AMDHD2Q9Y303 409 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 A0A1B0GVC2 190 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 A0A1W2PPH5 198 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 KCNK5O95279 499 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 HOXB5P09067 269 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 PBX3P40426 434 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 RARSP54136 660 aaKnown RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 GORABQ5T7V8 394 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 MARK2Q7KZI7 788 aaKnown RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 SLC26A9Q7LBE3 791 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 KMT5CQ86Y97 462 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 DCUN1D3Q8IWE4 304 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 ZBTB8BQ8NAP8 495 aaPredicted RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 MAGEC3Q8TD91 643 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 MMABQ96EY8 250 aaPredicted RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 TBATAQ96M53 351 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 WDFY2Q96P53 400 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 PGLYRP2Q96PD5 576 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 MMP28Q9H239 520 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 PLEKHA5Q9HAU0 1116 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 FBRSL1Q9HCM7 1045 aaKnown RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 KLHL1Q9NR64 748 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 TAS2R10Q9NYW0 307 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 ABI3Q9P2A4 366 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 KLHL20Q9Y2M5 609 aa4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 ARID4BQ4LE39 1312 aaPredicted RBP4.41□□□□□ -1.7
RNU4-28P-201ENST00000364739 GOLGA6L9A6NEM1 432 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 LILRA5A6NI73 299 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 ERVV-2B6SEH9 535 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 P2RY10O00398 339 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 CAPN9O14815 690 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 SPINT2O43291 252 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 KRT86O43790 486 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 SPARCP09486 303 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 FMO5P49326 533 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 F2RL1P55085 397 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 FOXM1Q08050 763 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 CDC16Q13042 620 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 OLIG2Q13516 323 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 KRT81Q14533 505 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 CDONQ4KMG0 1287 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 ASB18Q6ZVZ8 466 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 DPPA4Q7L190 304 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 INTS12Q96CB8 462 aaKnown RBP4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 ALG14Q96F25 216 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 SYT17Q9BSW7 474 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 POLR1BQ9H9Y6 1135 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 TAAR2Q9P1P5 351 aa4.4□□□□□ -1.71
RNU4-28P-201ENST00000364739 MLYCDO95822 493 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 TAS2R38P59533 333 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 OLR1P78380 273 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 PHEXP78562 749 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 GRIK2Q13002 908 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 GTF2H2Q13888 395 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 TBCEQ15813 527 aaPredicted RBP4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 TSTQ16762 297 aaKnown RBP4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 OTUD3Q5T2D3 398 aaPredicted RBP4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 GTF2H2CQ6P1K8 395 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF449Q6P9G9 518 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 BRAT1Q6PJG6 821 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 KCTD8Q6ZWB6 473 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 GSTA5Q7RTV2 222 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 NRROSQ86YC3 692 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 SLC44A1Q8WWI5 657 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 PIGTQ969N2 578 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 SMC6Q96SB8 1091 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 POLR3CQ9BUI4 534 aaPredicted RBP4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 MYH16Q9H6N6 1097 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 PTPRCP08575 1304 aa4.39□□□□□ -1.71
RNU4-28P-201ENST00000364739 FGF17O60258 216 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 PAGE4O60829 102 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 SLC22A3O75751 556 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 ARL1P40616 181 aaPredicted RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 USP8P40818 1118 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 AMPHP49418 695 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 CCR9P51686 369 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 COG7P83436 770 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 DMP1Q13316 513 aaPredicted RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 C18orf63Q68DL7 685 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 OR7E24Q6IFN5 339 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 TRNP1Q6NT89 227 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 FAM171BQ6P995 826 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 ZNF852Q6ZMS4 543 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 TRMT1LQ7Z2T5 733 aaKnown RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 EPHX4Q8IUS5 362 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 MAP7D3Q8IWC1 876 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 DIS3L2Q8IYB7 885 aaKnown RBP4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 TMEM116Q8NCL8 245 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 SLC24A4Q8NFF2 622 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 SLC38A5Q8WUX1 472 aa4.38□□□□□ -1.71
RNU4-28P-201ENST00000364739 SMARCE1Q969G3 411 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms