RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TSGA13Q96PP4 275 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 OR2M4Q96R27 311 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 DPYSL5Q9BPU6 564 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF670Q9BS34 389 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ANP32EQ9BTT0 268 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 FUCA2Q9BTY2 467 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 MAK16Q9BXY0 300 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ADGRE3Q9BY15 652 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 ZNHIT6Q9NWK9 470 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 KCNK4Q9NYG8 393 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 IFNKQ9P0W0 207 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 UVRAGQ9P2Y5 699 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 RPL26L1Q9UNX3 145 aaKnown RBP10.61□□□□□ -0.71
CAPN3-204ENST00000356316 CHKBQ9Y259 395 aa10.61□□□□□ -0.71
CAPN3-204ENST00000356316 HGSO14964 777 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 INPP4BO15327 924 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 MFSD11O43934 449 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 FZD6O60353 706 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 PROSCO94903 275 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 MAP3K6O95382 1288 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 PLA2G2AP14555 144 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 CD1CP29017 333 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 CASP14P31944 242 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 CSTF2P33240 577 aaKnown RBP eCLIP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 PBX1P40424 430 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 DSC2Q02487 901 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 TRA2AQ13595 282 aaKnown RBP eCLIP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 LRP8Q14114 963 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 NCBP2-AS2Q69YL0 99 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 XKR5Q6UX68 686 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF438Q7Z4V0 828 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 C17orf82Q86X59 251 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 ZFAND4Q86XD8 727 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 SLITRK4Q8IW52 837 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 RAVER1Q8IY67 606 aaKnown RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 CCDC13Q8IYE1 715 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 NAGSQ8N159 534 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 MAML1Q92585 1016 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 FATE1Q969F0 183 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 SCARF2Q96GP6 870 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 TAAR9Q96RI9 348 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 SLC38A3Q99624 504 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 RIOK2Q9BVS4 552 aaKnown RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 B3GNT4Q9C0J1 378 aa10.6□□□□□ -0.71
CAPN3-204ENST00000356316 STN1Q9H668 368 aaKnown RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 ARHGEF17Q96PE2 2063 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-204ENST00000356316 SCN8AQ9UQD0 1980 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 TRBV23OR9-2A0A075B6M9 112 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 IGHV5-10-1A0A0J9YXX1 117 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 A0A0U1RQS6 177 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 C1orf232A0A0U1RR37 186 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 RGSL1A5PLK6 1076 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 ANKRD66B4E2M5 251 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 B8ZZF3 427 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 STMND1H3BQB6 276 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 J3QKU1 62 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 EFSO43281 561 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 AKR1B10O60218 316 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 CLDN7O95471 211 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 GYPCP04921 128 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 TPM1P09493 284 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 ETV5P41161 510 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 ARSEP51690 589 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 STC1P52823 247 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 LIMK2P53671 638 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 GPLD1P80108 840 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 NR1D2Q14995 579 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 C16orf72Q14CZ0 275 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 PYCR3Q53H96 274 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 NKAIN2Q5VXU1 208 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 ZNF574Q6ZN55 896 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-204ENST00000356316 RFLNAQ6ZTI6 216 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 CHST15Q7LFX5 561 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-204ENST00000356316 TMPRSS9Q7Z410 1059 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 TRIM74Q86UV6 250 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 AGBL5Q8NDL9 886 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 RCBTB1Q8NDN9 531 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 LPCAT1Q8NF37 534 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 OR4D9Q8NGE8 314 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 OR10G6Q8NH81 332 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 SH3KBP1Q96B97 665 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 CCDC74BQ96LY2 380 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 NUDT22Q9BRQ3 303 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 MLPHQ9BV36 600 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-204ENST00000356316 TDRD1Q9BXT4 1180 aaKnown RBP10.59□□□□□ -0.71
CAPN3-204ENST00000356316 ASPSCR1Q9BZE9 553 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 FAM83DQ9H4H8 585 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 RMI1Q9H9A7 625 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 PKD2L2Q9NZM6 624 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 PLEKHM1Q9Y4G2 1056 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 HEY1Q9Y5J3 304 aa10.59□□□□□ -0.71
CAPN3-204ENST00000356316 IGHV1OR21-1A0A087WYE8 117 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 C9orf172C9J069 976 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms