RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TUBB1Q9H4B7 451 aa22.04■■□□□ 1.12
UPF3A-201ENST00000351487 ILVBLA1L0T0 632 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 NBNO60934 754 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 MATN4O95460 622 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 RPS17P08708 135 aaKnown RBP22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SLC7A1P30825 629 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 ROR2Q01974 943 aaKnown RBP22.03■■□□□ 1.12
UPF3A-201ENST00000351487 CLCQ05315 142 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 RAD51Q06609 339 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 GEN1Q17RS7 908 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 KIF19Q2TAC6 998 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 FBXO39Q8N4B4 442 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 PDZD8Q8NEN9 1154 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 TRPC4APQ8TEL6 797 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 OVCA2Q8WZ82 227 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 RMDN1Q96DB5 314 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SPON2Q9BUD6 331 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 C1QTNF3Q9BXJ4 246 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 EPB41L1Q9H4G0 881 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 STARD7Q9NQZ5 370 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 ABCD2Q9UBJ2 740 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 RNF112Q9ULX5 631 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 PTGDR2Q9Y5Y4 395 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SUPT3HB4E1H0 165 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SUPT3HO75486 399 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 ZNF26P17031 533 aaPredicted RBP22.03■■□□□ 1.12
UPF3A-201ENST00000351487 CES1P23141 567 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 FMO4P31512 558 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SCNN1BP51168 640 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SLC7A2P52569 658 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 GPNMBQ14956 572 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 CNPY1Q3B7I2 92 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 TMEM173Q86WV6 379 aaPredicted RBP22.03■■□□□ 1.12
UPF3A-201ENST00000351487 AHI1Q8N157 1196 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 MIER2Q8N344 545 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 DBF4BQ8NFT6 615 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SLCO4A1Q96BD0 722 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 TMEM175Q9BSA9 504 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 SDR39U1Q9NRG7 319 aaPredicted RBP22.03■■□□□ 1.12
UPF3A-201ENST00000351487 IKZF3Q9UKT9 509 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 FAM50BQ9Y247 325 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 VPS9D1Q9Y2B5 631 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 NDUFAF1Q9Y375 327 aa22.03■■□□□ 1.12
UPF3A-201ENST00000351487 C2orf81A6NN90 581 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 SYCE1LA8MT33 242 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 KLK8O60259 260 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 NDUFS3O75489 264 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 GALTP07902 379 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 EEF1DP29692 281 aaKnown RBP22.02■■□□□ 1.12
UPF3A-201ENST00000351487 LAYNQ6UX15 382 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 CHST9Q7L1S5 443 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 PLD4Q96BZ4 506 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 SCUBE2Q9NQ36 999 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 POLG2Q9UHN1 485 aa22.02■■□□□ 1.12
UPF3A-201ENST00000351487 STX16O14662 325 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 VPS4BO75351 444 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 ECI2O75521 394 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 LBPP18428 481 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 CD9P21926 228 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 CDKL1Q00532 357 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 PRMT9Q6P2P2 845 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 PRSS55Q6UWB4 352 aaPredicted RBP22.02■■□□□ 1.11
UPF3A-201ENST00000351487 NKAPQ8N5F7 415 aaKnown RBP22.02■■□□□ 1.11
UPF3A-201ENST00000351487 FUBP1Q96AE4 644 aaKnown RBP22.02■■□□□ 1.11
UPF3A-201ENST00000351487 EXOC2Q96KP1 924 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 BIRC8Q96P09 236 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 HOPXQ9BPY8 73 aaPredicted RBP22.02■■□□□ 1.11
UPF3A-201ENST00000351487 CWH43Q9H720 699 aa22.02■■□□□ 1.11
UPF3A-201ENST00000351487 SMIM31A0A1B0GVY4 71 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 NT5C1B-RDH14C9J2C7 533 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 NR5A2O00482 541 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 GJB5O95377 273 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 PYGLP06737 847 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 RHOCP08134 193 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 MRPL19P49406 292 aaKnown RBP22.01■■□□□ 1.11
UPF3A-201ENST00000351487 SP3Q02447 781 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 CREB5Q02930 508 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 GRB7Q14451 532 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 CYTH1Q15438 398 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 TSNQ15631 228 aaKnown RBP22.01■■□□□ 1.11
UPF3A-201ENST00000351487 COQ5Q5HYK3 327 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 ANKS6Q68DC2 871 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 OGFOD2Q6N063 350 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 TAS1R1Q7RTX1 841 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 DENND1CQ8IV53 801 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 DDIASQ8IXT1 998 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 PBXIP1Q96AQ6 731 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 KCNA7Q96RP8 456 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 GPR21Q99679 349 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 MRPL9Q9BYD2 267 aaKnown RBP22.01■■□□□ 1.11
UPF3A-201ENST00000351487 NACA2Q9H009 215 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF696Q9H7X3 374 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 PLK2Q9NYY3 685 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 MAP10Q9P2G4 905 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 SRRDQ9UH36 339 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 AGO1Q9UL18 857 aaKnown RBP22.01■■□□□ 1.11
UPF3A-201ENST00000351487 HTTP42858 3142 aa22.01■■□□□ 1.11
UPF3A-201ENST00000351487 ZNF840PA6NDX5 716 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 F11P03951 625 aa22■■□□□ 1.11
UPF3A-201ENST00000351487 HSPA8P11142 646 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms