RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 VGLL4Q14135 290 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MTX3Q5HYI7 312 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 OR4L1Q8NH43 312 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 NOX1Q9Y5S8 564 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MSI1O43347 362 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLITRK3O94933 977 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 OTCP00480 354 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CSH1P0DML2 217 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CSH2P0DML3 217 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MSX1P28360 303 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 RAB10P61026 200 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TMEM63BQ5T3F8 832 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 UBAP2Q5T6F2 1119 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ERICH5Q6P6B1 374 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC22A8Q8TCC7 542 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 FKBP14Q9NWM8 211 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TLR5O60602 858 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 TNFSF9P41273 254 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 CYP27C1Q4G0S4 372 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 C10orf107Q8IVU9 208 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 OR5M3Q8NGP4 307 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 MAP3K14Q99558 947 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 PNO1Q9NRX1 252 aaKnown RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 COPS7AQ9UBW8 275 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 OR2AG2A6NM03 316 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 METTL18O95568 372 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 GLUD1P00367 558 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 FGBP02675 491 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 CDK7P50613 346 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 B3GNT6Q6ZMB0 384 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 C7orf61Q8IZ16 206 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DCBLD1Q8N8Z6 715 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 HJURPQ8NCD3 748 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 KIAA0895Q8NCT3 520 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 HPS1Q92902 700 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ST3GAL5Q9UNP4 418 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 FPGTO14772 594 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 PAX7P23759 505 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DLG2Q15700 870 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 CPTPQ5TA50 214 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 LRRC70Q7Z2Q7 622 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ZSCAN5BA6NJL1 495 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 COX4I1P13073 169 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ARHGAP22Q7Z5H3 698 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 HID1Q8IV36 788 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 FBXW8Q8N3Y1 598 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 KIAA1683Q9H0B3 1180 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 SLC33A1O00400 549 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 MDM4O15151 490 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 PGAM2P15259 253 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 FAM35AQ86V20 835 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ALYREFQ86V81 257 aaKnown RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ARL10Q8N8L6 244 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 GTPBP2Q9BX10 602 aaKnown RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 EBPLQ9BY08 206 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ABI3Q9P2A4 366 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DKK3Q9UBP4 350 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 A0A0A0MRY4 1105 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 APOC1P02654 83 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 CCNOP22674 350 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 RPL3P39023 403 aaKnown RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 MTHFRP42898 656 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 PPP3R1P63098 170 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 RASGRP3Q8IV61 690 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 DAGLBQ8NCG7 672 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 SUN3Q8TAQ9 357 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 SPATA13Q96N96 652 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
SHANK2-201ENST00000338508 SLC39A8Q9C0K1 460 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 OR51V1Q9H2C8 321 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 ASB7Q9H672 318 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 TMEM27Q9HBJ8 222 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 C11orf16Q9NQ32 467 aa11.74□□□□□ -0.53
SHANK2-201ENST00000338508 TEX46H3BTG2 121 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 OR1F1O43749 312 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 LAMP2P13473 410 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHANK2-201ENST00000338508 PSME3P61289 254 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHANK2-201ENST00000338508 LDLRAP1Q5SW96 308 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
SHANK2-201ENST00000338508 RHBDF2Q6PJF5 856 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms