RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 NPC1O15118 1278 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 GLRA3O75311 464 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 UGT1A6P19224 532 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ITGALP20701 1170 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 UGT1A1P22309 533 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 UGT1A4P22310 534 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CRABP2P29373 138 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 FMO4P31512 558 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 UGT1A3P35503 534 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 UGT1A5P35504 534 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 SEC24CP53992 1094 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 IRX4P78413 519 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 GRSF1Q12849 480 aaKnown RBP eCLIP14.63□□□□□ -0.07
CBX3-201ENST00000337620 NFATC2Q13469 925 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ENPP2Q13822 863 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CHRNA6Q15825 494 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 LEXMQ3ZCV2 418 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 N4BP2L1Q5TBK1 243 aaPredicted RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 SDE2Q6IQ49 451 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ZNF549Q6P9A3 640 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 DPPA4Q7L190 304 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 SNX20Q7Z614 316 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CACUL1Q86Y37 369 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 PLD6Q8N2A8 252 aaKnown RBP14.63□□□□□ -0.07
CBX3-201ENST00000337620 ARMC2Q8NEN0 867 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 CKAP2Q8WWK9 683 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 OLFM1Q99784 485 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ZNF358Q9NW07 568 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 PKD2L2Q9NZM6 624 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
CBX3-201ENST00000337620 OR1I1O60431 355 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 DNAJC6O75061 913 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 SPINT3P49223 89 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 TMEM196Q5HYL7 178 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 RNF187Q5TA31 235 aaPredicted RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 HSD11B1LQ7Z5J1 315 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 CCDC63Q8NA47 563 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 ZNF398Q8TD17 642 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 SCG3Q8WXD2 468 aaKnown RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 LPGAT1Q92604 370 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 CCDC68Q9H2F9 335 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 VPS9D1Q9Y2B5 631 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 ACOT9Q9Y305 439 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 RNASEH1O60930 286 aaKnown RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 ELFN1P0C7U0 828 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 SLC35E2BP0CK96 405 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 DRD1P21728 446 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 NTSR1P30989 418 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 MMP12P39900 470 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 ETV4P43268 484 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 PTPN5P54829 565 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 CDKN2DP55273 166 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 PFKPQ01813 784 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 ZKSCAN8Q15776 578 aaPredicted RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 FAM46CQ5VWP2 391 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 FAM45BPQ6NSW5 357 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 SERPINA9Q86WD7 417 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 FAM45AQ8TCE6 357 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 TSPAN17Q96FV3 270 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 TTC1Q99614 292 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 WRAP53Q9BUR4 548 aaKnown RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 TMEM216Q9P0N5 145 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 CRLS1Q9UJA2 301 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 CORO1CQ9ULV4 474 aaPredicted RBP14.62□□□□□ -0.07
CBX3-201ENST00000337620 ANKRD6Q9Y2G4 727 aa14.62□□□□□ -0.07
CBX3-201ENST00000337620 SCN8AQ9UQD0 1980 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 GMNCA6NCL1 334 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 NEMP1O14524 444 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 ADRB3P13945 408 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 IL9P15248 144 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 CA5AP35218 305 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 PPARGP37231 505 aaPredicted RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 ETV3P41162 512 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 CSRP3P50461 194 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 TFF2Q03403 129 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 ILF2Q12905 390 aaKnown RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 RALGDSQ12967 914 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 CAMK2GQ13555 558 aaPredicted RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 INSCQ1MX18 579 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 ZDHHC20Q5W0Z9 365 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 CERS6Q6ZMG9 384 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 Q6ZVL8 140 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 ERN2Q76MJ5 926 aaKnown RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 SPNS2Q8IVW8 549 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 IL17RCQ8NAC3 791 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 FAM136AQ96C01 138 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 MAGEB18Q96M61 343 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 TSNARE1Q96NA8 513 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 PLEKHG4BQ96PX9 1271 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 AARSD1Q9BTE6 412 aaKnown RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 FAM107BQ9H098 131 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 EPN3Q9H201 632 aa14.61□□□□□ -0.07
CBX3-201ENST00000337620 RUVBL2Q9Y230 463 aaKnown RBP14.61□□□□□ -0.07
CBX3-201ENST00000337620 KLF8O95600 359 aaPredicted RBP14.6□□□□□ -0.07
CBX3-201ENST00000337620 GSTA1P08263 222 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 NEFHP12036 1026 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 CD72P21854 359 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 PTGER3P43115 390 aa14.6□□□□□ -0.07
CBX3-201ENST00000337620 LIG3P49916 1009 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms