RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ASPHQ12797 758 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 TCEAL5Q5H9L2 206 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 TRIM68Q6AZZ1 485 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 ATG14Q6ZNE5 492 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 BPIFB1Q8TDL5 484 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SKA1Q96BD8 255 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 ASB16Q96NS5 453 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SLC30A1Q9Y6M5 507 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SCN8AQ9UQD0 1980 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 DGKGP49619 791 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 RPS6KA3P51812 740 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 PDAP1Q13442 181 aaKnown RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 CDKN3Q16667 212 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SPDYAQ5MJ70 313 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SPNS2Q8IVW8 549 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 FGF13Q92913 245 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SMARCD2Q92925 531 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.2□□□□□ -0.144e-7■■■■■ 53.9
C9orf3-202ENST00000297979 ZNF641Q96N77 438 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 LYSMD1Q96S90 227 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 SLC28A3Q9HAS3 691 aa14.2□□□□□ -0.14
C9orf3-202ENST00000297979 MTF2Q9Y483 593 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 ZNF106Q9H2Y7 1883 aaKnown RBP14.2□□□□□ -0.14
C9orf3-202ENST00000297979 RHOBTB1O94844 696 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 IMPDH2P12268 514 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 ZNF37AP17032 561 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 ATP5F1P24539 256 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 SERPINB3P29508 390 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 RECQLP46063 649 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 ZBTB16Q05516 673 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 TAS2R42Q7RTR8 314 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PLPP6Q8IY26 295 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 MYLIPQ8WY64 445 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 IGFLR1Q9H665 355 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 TMEM165Q9HC07 324 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 TAS2R13Q9NYV9 303 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CAPN7Q9Y6W3 813 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 BOLA2-SMG1P6H3BVE0 249 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 DNAJC8O75937 253 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CLDN7O95471 211 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 UGT2B4P06133 528 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 NNMTP40261 264 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PFKPQ01813 784 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PTPRNQ16849 979 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 HSF5Q4G112 596 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 USP45Q70EL2 814 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CLNKQ7Z7G1 428 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 TXNDC5Q8NBS9 432 aaKnown RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 OR2A12Q8NGT7 310 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 WFIKKN2Q8TEU8 576 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CYB5D2Q8WUJ1 264 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PPP2R3CQ969Q6 453 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 SGF29Q96ES7 293 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 ASIC4Q96FT7 647 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 MRGPRX3Q96LB0 322 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 DRC3Q9H069 523 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PNPOQ9NVS9 261 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 PPIL1Q9Y3C6 166 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 A0A1W2PQ67 120 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 NPIPB15A6NHN6 443 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 WASH3PC4AMC7 463 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 TFEBP19484 476 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 SP100P23497 879 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 NAGLUP54802 743 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 NCALDP61601 193 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 RCN2Q14257 317 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 FAM151BQ6UXP7 276 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 STK40Q8N2I9 435 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 SORCS1Q8WY21 1168 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CCDC126Q96EE4 140 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 SCRN2Q96FV2 425 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 BIRC8Q96P09 236 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 APOL5Q9BWW9 433 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 CIPCQ9C0C6 399 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 POMKQ9H5K3 350 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 STN1Q9H668 368 aaKnown RBP14.19□□□□□ -0.14
C9orf3-202ENST00000297979 NUMBLQ9Y6R0 609 aa14.19□□□□□ -0.14
C9orf3-202ENST00000297979 OR1I1O60431 355 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 NFATC1O95644 943 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 CISD3P0C7P0 127 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 PKMP14618 531 aaKnown RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 SKIV2L2P42285 1042 aaKnown RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 PTGER3P43115 390 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 MAGEA9P43362 315 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 DNAJB13P59910 316 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 CERS6Q6ZMG9 384 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 TPRG1Q6ZUI0 275 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 GPR149Q86SP6 731 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 FRS2Q8WU20 508 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 FAM136AQ96C01 138 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 MRPL38Q96DV4 380 aaKnown RBP14.18□□□□□ -0.14
C9orf3-202ENST00000297979 SYTL2Q9HCH5 934 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 TXLNGQ9NUQ3 528 aa14.18□□□□□ -0.14
C9orf3-202ENST00000297979 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms