RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SLC1A6P48664 564 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 XIAPP98170 497 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 ACVR1Q04771 509 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 RAB30Q15771 203 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 GAB4Q2WGN9 574 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 HSF5Q4G112 596 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 ZNF648Q5T619 568 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 PAQR3Q6TCH7 311 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 SDCCAG8Q86SQ7 713 aaPredicted RBP10.94□□□□□ -0.66
GGPS1-201ENST00000282841 TTC7BQ86TV6 843 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 GPR26Q8NDV2 337 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 KCNK13Q9HB14 408 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 IGSF5Q9NSI5 407 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 NSMCE4AQ9NXX6 385 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 KLHL14Q9P2G3 628 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 MED16Q9Y2X0 877 aa10.94□□□□□ -0.66
GGPS1-201ENST00000282841 TCF20Q9UGU0 1960 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 CCT8L1PA6NM43 557 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 SRRM3A6NNA2 597 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 KPNA3O00505 521 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 HTRA2O43464 458 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 DLX3O60479 287 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 RHOBTB1O94844 696 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 HNRNPH1P31943 449 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 RECQLP46063 649 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 CHRNA6Q15825 494 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 RNF43Q68DV7 783 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 LRRC8EQ6NSJ5 796 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ANKRD54Q6NXT1 300 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 CCDC121Q6ZUS5 278 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 DET1Q7L5Y6 550 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 TRPM8Q7Z2W7 1104 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 MTDHQ86UE4 582 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ALYREFQ86V81 257 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 TDHQ8IZJ6 230 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 AHI1Q8N157 1196 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 FRS2Q8WU20 508 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ISL2Q96A47 359 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ESAMQ96AP7 390 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 GPR21Q99679 349 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 TACO1Q9BSH4 297 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ASB8Q9H765 288 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 BRD9Q9H8M2 597 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ZFP14Q9HCL3 533 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 B4GALT6Q9UBX8 382 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ARL2BPQ9Y2Y0 163 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 STARD13Q9Y3M8 1113 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 NUMA1Q14980 2115 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 GAPDHSO14556 408 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 KIAA0754O94854 1291 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ADH1CP00326 375 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 HNRNPLP14866 589 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■□□□□ 10.6
GGPS1-201ENST00000282841 CHRM3P20309 590 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 GDI1P31150 447 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 HMGCLP35914 325 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 AQP5P55064 265 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 PTSQ03393 145 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 GRIN2CQ14957 1233 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 FNDC3BQ53EP0 1204 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 SETMARQ53H47 684 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 C10orf82Q8WW14 230 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 LPGAT1Q92604 370 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 PTERQ96BW5 349 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 BIRC8Q96P09 236 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 FAM83CQ9BQN1 747 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 WRAP53Q9BUR4 548 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 GATA5Q9BWX5 397 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 TMEM120AQ9BXJ8 343 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 POMKQ9H5K3 350 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 MKS1Q9NXB0 559 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ELOVL2Q9NXB9 296 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 CACNA2D2Q9NY47 1150 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 UTP6Q9NYH9 597 aaKnown RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 ARMCX1Q9P291 453 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 DEC1Q9P2X7 70 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 PLA2G4CQ9UP65 541 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 PRSS21Q9Y6M0 314 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 WASF2Q9Y6W5 498 aa10.93□□□□□ -0.66
GGPS1-201ENST00000282841 KIF26AQ9ULI4 1882 aaPredicted RBP10.93□□□□□ -0.66
GGPS1-201ENST00000282841 TMEM233B4DJY2 109 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 POP4O95707 220 aaKnown RBP10.92□□□□□ -0.66
GGPS1-201ENST00000282841 PFKLP17858 780 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 TFEBP19484 476 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 CES1P23141 567 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 GRIA4P48058 902 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 CSRP3P50461 194 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 POU4F1Q01851 419 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 OCRLQ01968 901 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 CCDC85BQ15834 202 aaPredicted RBP10.92□□□□□ -0.66
GGPS1-201ENST00000282841 CDKN3Q16667 212 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 AFTPHQ6ULP2 937 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 GDPD4Q6W3E5 623 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 RGS9BPQ6ZS82 235 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 STK40Q8N2I9 435 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 ZNF781Q8N8C0 355 aa10.92□□□□□ -0.66
GGPS1-201ENST00000282841 TXNDC5Q8NBS9 432 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms