RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 RTP3Q9BQQ7 232 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 BTBD10Q9BSF8 475 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 RHOBTB2Q9BYZ6 727 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 RNF112Q9ULX5 631 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 SNX6Q9UNH7 406 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 B2RBV5 119 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 STX16-NPEPL1H3BU86 382 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 STX16O14662 325 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CBSLP0DN79 551 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 RPA3P35244 121 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CBSP35520 551 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 HMGCLP35914 325 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 SH3PXD2AQ5TCZ1 1133 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 GLT6D1Q7Z4J2 308 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 SCAMP5Q8TAC9 235 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 TRIT1Q9H3H1 467 aaKnown RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 NPHS2Q9NP85 383 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 GALNT8Q9NY28 637 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 NDUFA13Q9P0J0 144 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 NDUFAF1Q9Y375 327 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CHURC1-FNTBB4DL54 471 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 TPP1O14773 563 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 MAFKO60675 156 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 PROCP04070 461 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 BGNP21810 368 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 SLC1A6P48664 564 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 STC1P52823 247 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 TAF13Q15543 124 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 RTP2Q5QGT7 225 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 IYDQ6PHW0 289 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 PYROXD2Q8N2H3 581 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 RNASE11Q8TAA1 199 aaKnown RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 MGME1Q9BQP7 344 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 FAM126AQ9BYI3 521 aaPredicted RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 SHCBP1LQ9BZQ2 653 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CRISPLD2Q9H0B8 497 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 ALG13Q9NP73 1137 aaKnown RBP8.21□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF711Q9Y462 761 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 CPQQ9Y646 472 aa8.21□□□□□ -1.1
PTPN3-201ENST00000262539 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 RFPL1O75677 317 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CXCL14O95715 111 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 ALDH9A1P49189 494 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 ADARP55265 1226 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SMU1Q2TAY7 513 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CAPRIN2Q6IMN6 1127 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 FSTL4Q6MZW2 842 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 KDELC1Q6UW63 502 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 NMUR1Q9HB89 426 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 UBDO15205 165 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 FTH1P02794 183 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 LBPP18428 481 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 NIPAL4Q0D2K0 466 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SLC1A5Q15758 541 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 HTR3DQ70Z44 454 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CYP4X1Q8N118 509 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 KYQ8NBH2 561 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 C2CD4AQ8NCU7 369 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 REPS1Q96D71 796 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 VPS50Q96JG6 964 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 PPP3R2Q96LZ3 170 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 MRPS23Q9Y3D9 190 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CD3EAPO15446 510 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 POLR2EP19388 210 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 ATP4BP51164 291 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 LCP2Q13094 533 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 DPY19L1Q2PZI1 675 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 KIAA0319Q5VV43 1072 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 TFAP2DQ7Z6R9 452 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 RBM23Q86U06 439 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 MIER2Q8N344 545 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF333Q96JL9 665 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 TDRD1Q9BXT4 1180 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 IL1RL2Q9HB29 575 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SLC40A1Q9NP59 571 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 OXSMQ9NWU1 459 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 XPR1Q9UBH6 696 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SNX8Q9Y5X2 465 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 TBC1D3BA6NDS4 549 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 PSMD11O00231 422 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 TRIM16O95361 564 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 GJB5O95377 273 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 OLFM2O95897 454 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CAPN1P07384 714 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 HALP42357 657 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 THOP1P52888 689 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SP140Q13342 867 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 CLEC4FQ8N1N0 589 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 GATA5Q9BWX5 397 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 RAI2Q9Y5P3 530 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 LOC285095A0A1B0GVY8 99 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 H7C0S8 307 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 TIPRLO75663 272 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 GPR1P46091 355 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 PEX6Q13608 980 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SAMD4BQ5PRF9 694 aaKnown RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 NATD1Q8N6N6 113 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SLC12A4Q9UP95 1085 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 COPG1Q9Y678 874 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms