RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 RRN3P2A6NIE6 340 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 TRIM64CA6NLI5 447 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 K7EPI3 171 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 OCM2P0CE71 109 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 OCMP0CE72 109 aaPredicted RBP17.91■□□□□ 0.46
TRAF4-201ENST00000262395 MAP4P27816 1152 aaKnown RBP17.91■□□□□ 0.46
TRAF4-201ENST00000262395 UFM1P61960 85 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 TIGD2Q4W5G0 525 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 TMTC4Q5T4D3 741 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 ANKRD26P1Q6NSI1 321 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 KIAA0408Q6ZU52 694 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 MINDY1Q8N5J2 469 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 PACRGLQ8N7B6 248 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 BLOC1S5Q8TDH9 187 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 TMEM125Q96AQ2 219 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 ACOX2Q99424 681 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 SLC30A3Q99726 388 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 GID8Q9NWU2 228 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 ARL5AQ9Y689 179 aa17.91■□□□□ 0.46
TRAF4-201ENST00000262395 ASPDHA6ND91 283 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 HAPLN1P10915 354 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 HSD17B1P14061 328 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 CD1DP15813 335 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 RFC2P35250 354 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 PIGFQ07326 219 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 PHYKPLQ8IUZ5 450 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 KLHDC8BQ8IXV7 354 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 GPRC5AQ8NFJ5 357 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 PTCD2Q8WV60 388 aaKnown RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 L3HYPDHQ96EM0 354 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 ADNPQ9H2P0 1102 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 PTBP2Q9UKA9 531 aaKnown RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 PCDHA9Q9Y5H5 950 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 C1orf232A0A0U1RR37 186 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 BBIP1A8MTZ0 92 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 SUPT3HB4E1H0 165 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 CLASP2O75122 1294 aaKnown RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 FUCA1P04066 466 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 LBPP18428 481 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 EEF1DP29692 281 aaKnown RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 BRCC3P46736 316 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 SEMA3AQ14563 771 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 TIGD5Q53EQ6 642 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 SPRED1Q7Z699 444 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 SLC15A4Q8N697 577 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 DDHD1Q8NEL9 900 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 HBEGFQ99075 208 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 MRM3Q9HC36 420 aaKnown RBP17.9■□□□□ 0.46
TRAF4-201ENST00000262395 ANAPC2Q9UJX6 822 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 COQ6Q9Y2Z9 468 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 BRCA2P51587 3418 aa17.9■□□□□ 0.46
TRAF4-201ENST00000262395 E9PAM4 449 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 DCKP27707 260 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 LHX1P48742 406 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 PPP1R8Q12972 351 aaKnown RBP17.89■□□□□ 0.46
TRAF4-201ENST00000262395 ITIH5Q86UX2 942 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 BORCS5Q969J3 196 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 COX4I2Q96KJ9 171 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 TRMOQ9BU70 441 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 CATSPERBQ9H7T0 1116 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 RMI1Q9H9A7 625 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 MRGBPQ9NV56 204 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 PKD2L2Q9NZM6 624 aa17.89■□□□□ 0.46
TRAF4-201ENST00000262395 TSR3Q9UJK0 312 aaKnown RBP17.89■□□□□ 0.46
TRAF4-201ENST00000262395 NYNRINQ9P2P1 1898 aaKnown RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 ZNF236Q9UL36 1845 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 UBA6A0AVT1 1052 aaPredicted RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 ENPP3O14638 875 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 IRAK2O43187 625 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 MTHFD2P13995 350 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 ATP4BP51164 291 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 SCNN1GP51170 649 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 GALNT1Q10472 559 aaPredicted RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 BNIP2Q12982 314 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 GALNT18Q6P9A2 607 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 BLOC1S3Q6QNY0 202 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 DCDC5Q6ZRR9 648 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 KIAA2013Q8IYS2 634 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 CENPSQ8N2Z9 138 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 PDZD8Q8NEN9 1154 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 OR13C4Q8NGS5 318 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 BIRC7Q96CA5 298 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 UXTQ9UBK9 157 aaPredicted RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 IKZF3Q9UKT9 509 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
TRAF4-201ENST00000262395 FNDC3AQ9Y2H6 1198 aaKnown RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 OAS3Q9Y6K5 1087 aaKnown RBP17.89■□□□□ 0.45
TRAF4-201ENST00000262395 SMIM35A0A1B0GVV1 85 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 LDLRP01130 860 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 SHMT2P34897 504 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 GJA5P36382 358 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 AGTR2P50052 363 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 OR4D2P58180 307 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 TIAL1Q01085 375 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■■□□□ 11.9
TRAF4-201ENST00000262395 AAK1Q2M2I8 961 aa17.88■□□□□ 0.45
TRAF4-201ENST00000262395 ZNF829Q3KNS6 432 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms