RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 LIMD1Q9UGP4 676 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 RPS6KA6Q9UK32 745 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 EPOP01588 193 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 LRRC23Q53EV4 343 aaPredicted RBP14.95□□□□□ -0.02
UBE4B-201ENST00000253251 C17orf64Q86WR6 236 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 AHI1Q8N157 1196 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SETD9Q8NE22 299 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 ARNTL2Q8WYA1 636 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 NXNL1Q96CM4 212 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 THAP11Q96EK4 314 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 ABHD8Q96I13 439 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 ANAPC2Q9UJX6 822 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 C9IYK1 514 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 LATS1O95835 1130 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 CHRNA1P02708 482 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 IFNGR2P38484 337 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 RPS24P62847 133 aaKnown RBP14.95□□□□□ -0.02
UBE4B-201ENST00000253251 ECT2LQ008S8 904 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SULT1C3Q6IMI6 304 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 BRAT1Q6PJG6 821 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SNX20Q7Z614 316 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SERPINA9Q86WD7 417 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 BANPQ8N9N5 519 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 DCAF4L2Q8NA75 395 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SPATA5L1Q9BVQ7 753 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 AASDHPPTQ9NRN7 309 aa14.95□□□□□ -0.02
UBE4B-201ENST00000253251 SHOX2O60902 331 aaPredicted RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 HLA-DQB2P05538 268 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 TNNI3P19429 210 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 LCP2Q13094 533 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 SLC1A5Q15758 541 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 TXNRD3NBQ6F5E7 133 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 GPR180Q86V85 440 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 ATG16L2Q8NAA4 619 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 HOPXQ9BPY8 73 aaPredicted RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 NUSAP1Q9BXS6 441 aaKnown RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 TNKS2Q9H2K2 1166 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 ABCB8Q9NUT2 735 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 MEI4A8MW99 385 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 OAZ2O95190 189 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 FSHRP23945 695 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 PSMD8P48556 350 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 NUP107P57740 925 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 RPL38P63173 70 aaKnown RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 MPP1Q00013 466 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 TRAF2Q12933 501 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 DLG2Q15700 870 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 LSM12Q3MHD2 195 aaKnown RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 SPPL2AQ8TCT8 520 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 YIPF3Q9GZM5 350 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 MRM3Q9HC36 420 aaKnown RBP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 TBX18O95935 607 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.028e-11■■■■■ 27.8
UBE4B-201ENST00000253251 GSTA3Q16772 222 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 C16orf87Q6PH81 154 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 IZUMO2Q6UXV1 221 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 CPNE8Q86YQ8 564 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 USP7Q93009 1102 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 AIF1LQ9BQI0 150 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 RTKNQ9BST9 563 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 EPS8L2Q9H6S3 715 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 MIOSQ9NXC5 875 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 NPEPPSL1A6NEC2 478 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 KDELR3O43731 214 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 PIAS1O75925 651 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 HNRNPA1P09651 372 aaKnown RBP eCLIP14.94□□□□□ -0.02
UBE4B-201ENST00000253251 PRDX6P30041 224 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 HLA-DQA1Q5Y7H0 255 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 CHSY3Q70JA7 882 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 PLD3Q8IV08 490 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 ITCHQ96J02 903 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 B3GALT6Q96L58 329 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 SUV39H2Q9H5I1 410 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 PHF24Q9UPV7 400 aa14.94□□□□□ -0.02
UBE4B-201ENST00000253251 RABGGTBP53611 331 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 RUNX1T1Q06455 604 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 SCAPQ12770 1279 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 MS4A13Q5J8X5 152 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 CYP4Z2PQ8N1L4 340 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 ZNF786Q8N393 782 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 SRFBP1Q8NEF9 429 aaKnown RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 ING5Q8WYH8 240 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PROX1Q92786 737 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 FERD3LQ96RJ6 166 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 TFB2MQ9H5Q4 396 aaKnown RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 MFHAS1Q9Y4C4 1052 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 ASMTP46597 345 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 SOX4Q06945 474 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 AP5B1Q2VPB7 878 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 TCHHL1Q5QJ38 904 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 KLHL32Q96NJ5 620 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 IL23AQ9NPF7 189 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 TDP1Q9NUW8 608 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 FKBPLQ9UIM3 349 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 LRCH1Q9Y2L9 728 aa14.93□□□□□ -0.02
UBE4B-201ENST00000253251 PAPSS2O95340 614 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-201ENST00000253251 ABCB1P08183 1280 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms