RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TMA16Q96EY4 203 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 C3orf30Q96M34 536 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 CYP2S1Q96SQ9 504 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 AKTIPQ9H8T0 292 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 CCDC167Q9P0B6 97 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 COMMD10Q9Y6G5 202 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PRSS51A0A1B0GVH4 220 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 SYCE1LA8MT33 242 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 STX16O14662 325 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TRIM24O15164 1050 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 FZD6O60353 706 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 NRP2O60462 931 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 CLASP2O75122 1294 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TMCC1O94876 653 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 C1RP00736 705 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PKMP14618 531 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TSPAN8P19075 237 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 GPX3P22352 226 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TRAP1Q12931 704 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 TRAF2Q12933 501 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PHYKPLQ8IUZ5 450 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 FUNDC1Q8IVP5 155 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PIANPQ8IYJ0 282 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 MUC3BQ9H195 1237 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 MID1IP1Q9NPA3 183 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 PDP2Q9P2J9 529 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 DNMT3BQ9UBC3 853 aaKnown RBP16.1■□□□□ 0.17
UBE3D-201ENST00000237186 LHX3Q9UBR4 397 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 FAM50BQ9Y247 325 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 OR51B4Q9Y5P0 310 aa16.1■□□□□ 0.17
UBE3D-201ENST00000237186 C2orf78A6NCI8 922 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 PPP6CO00743 305 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TSPAN3O60637 253 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 RPS17P08708 135 aaKnown RBP16.09■□□□□ 0.17
UBE3D-201ENST00000237186 ALDOCP09972 364 aaKnown RBP16.09■□□□□ 0.17
UBE3D-201ENST00000237186 GFAPP14136 432 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 ARSAP15289 507 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 VCLP18206 1134 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 CLCQ05315 142 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 LCP2Q13094 533 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 PTPRNQ16849 979 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 MMEL1Q495T6 779 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TXNDC11Q6PKC3 985 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 PAOXQ6QHF9 649 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 ANKRD33Q7Z3H0 272 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TICAM1Q8IUC6 712 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 FBXO39Q8N4B4 442 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TWIST2Q8WVJ9 160 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 FUBP1Q96AE4 644 aaKnown RBP16.09■□□□□ 0.17
UBE3D-201ENST00000237186 ZFRQ96KR1 1074 aaKnown RBP16.09■□□□□ 0.17
UBE3D-201ENST00000237186 BEGAINQ9BUH8 593 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 HIPK3Q9H422 1215 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TMEM181Q9P2C4 612 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 CD300AQ9UGN4 299 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 RIMS3Q9UJD0 308 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 RNF112Q9ULX5 631 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TMCO1Q9UM00 188 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
UBE3D-201ENST00000237186 E7ENX8 843 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 STX7O15400 261 aaKnown RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 GREM1O60565 184 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 PQBP1O60828 265 aaKnown RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 VPS4BO75351 444 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 VPS26AO75436 327 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 ECI2O75521 394 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 TSPAN12O95859 305 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 MC4RP32245 332 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 MRPL19P49406 292 aaKnown RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 AQP4P55087 323 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 CCL23P55773 120 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 STX1BP61266 288 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 MRPS22P82650 360 aaKnown RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 MED21Q13503 144 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 RAB33AQ14088 237 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 ADGRE1Q14246 886 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 VEPH1Q14D04 833 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 TAF12Q16514 161 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 LRRC36Q1X8D7 754 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 AARS2Q5JTZ9 985 aaKnown RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 TMEM150AQ86TG1 271 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 CATSPER1Q8NEC5 780 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 BHLHE22Q8NFJ8 381 aaPredicted RBP16.08■□□□□ 0.17
UBE3D-201ENST00000237186 KCNJ9Q92806 393 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 ROPN1LQ96C74 230 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 GPR21Q99679 349 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 C19orf43Q9BQ61 176 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 FEM1AQ9BSK4 669 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 SPAG4Q9NPE6 437 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 IKZF3Q9UKT9 509 aa16.08■□□□□ 0.17
UBE3D-201ENST00000237186 BBIP1A8MTZ0 92 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 SNAP91O60641 907 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 MSX2P35548 267 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 CDKN1CP49918 316 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 FOXA1P55317 472 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 PLD1Q13393 1074 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms