RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ALDH3B2P48448 385 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 STC1P52823 247 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 TYSND1Q2T9J0 566 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 LCN8Q6JVE9 175 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 BRSK1Q8TDC3 778 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 TRPC4APQ8TEL6 797 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.22■□□□□ 0.19
LTBR-201ENST00000228918 TRIM15Q9C019 465 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 SDR39U1Q9NRG7 319 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 HSFX1Q9UBD0 423 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 POLG2Q9UHN1 485 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 C9JVG2 144 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 H3BSA7 217 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 CLASP2O75122 1294 aaKnown RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 GFAPP14136 432 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 LBPP18428 481 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 PCSK6P29122 969 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 BNIP2Q12982 314 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 BTG3Q14201 252 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 ZNF235Q14590 738 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 NFE2Q16621 373 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 IL31Q6EBC2 164 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 OR4L1Q8NH43 312 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 RMND5BQ96G75 393 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 RPRD1AQ96P16 312 aaPredicted RBP16.22■□□□□ 0.19
LTBR-201ENST00000228918 CYP2S1Q96SQ9 504 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 CAAP1Q9H8G2 361 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 CMTM6Q9NX76 183 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 RIMKLBQ9ULI2 386 aa16.22■□□□□ 0.19
LTBR-201ENST00000228918 DHRS12A0PJE2 317 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 PRAMEF11O60813 436 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 KERAO60938 352 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 EPOP01588 193 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 PIRTP0C851 137 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 SLC6A2P23975 617 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 COQ5Q5HYK3 327 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 TBCELQ5QJ74 424 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 ZNF280BQ86YH2 543 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 MIB1Q86YT6 1006 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 FIBCD1Q8N539 461 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 PACRGLQ8N7B6 248 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 TRIML2Q8N7C3 387 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 MIPOL1Q8TD10 442 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 LZICQ8WZA0 190 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 TFAP2CQ92754 450 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 TUBGCP3Q96CW5 907 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
LTBR-201ENST00000228918 IL37Q9NZH6 218 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CIDEBQ9UHD4 219 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 BTRCQ9Y297 605 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CHD5Q8TDI0 1954 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 FRMPD3Q5JV73 1810 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 A0A1B0GTL3 188 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 HNRNPRO43390 633 aaKnown RBP16.21■□□□□ 0.19
LTBR-201ENST00000228918 PRSS56P0CW18 603 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CYBAP13498 195 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 HGFP14210 728 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CHRM3P20309 590 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CLCQ05315 142 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 LCP2Q13094 533 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 CAPRIN1Q14444 709 aaKnown RBP16.21■□□□□ 0.19
LTBR-201ENST00000228918 INPP5AQ14642 412 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 INTS11Q5TA45 600 aaKnown RBP16.21■□□□□ 0.19
LTBR-201ENST00000228918 EPHX4Q8IUS5 362 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 TTC9BQ8N6N2 239 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 MFSD2AQ8NA29 543 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 GOLM1Q8NBJ4 401 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 KIAA1191Q96A73 305 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 MYEOVQ96EZ4 313 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 PDFQ9HBH1 243 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 SLC52A3Q9NQ40 469 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 AGPAT4Q9NRZ5 378 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
LTBR-201ENST00000228918 ACTR3BQ9P1U1 418 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 EGFL7Q9UHF1 273 aa16.21■□□□□ 0.19
LTBR-201ENST00000228918 VWA8A3KMH1 1905 aa16.21■□□□□ 0.18
LTBR-201ENST00000228918 FAM92AA1XBS5 289 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SAC3D1A6NKF1 404 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SUPT3HB4E1H0 165 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SUPT3HO75486 399 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 IGLV3-27P01718 113 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 HMBSP08397 361 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 LINC00032P0C843 101 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 IDO1P14902 403 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 EEF1DP29692 281 aaKnown RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 OR1E1P30953 314 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 MAPKAPK2P49137 400 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 YBEYP58557 167 aaPredicted RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 YBX1P67809 324 aaKnown RBP16.2■□□□□ 0.18
LTBR-201ENST00000228918 TUBA4AP68366 448 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 FOXM1Q08050 763 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 BLOC1S3Q6QNY0 202 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 SPPL2CQ8IUH8 684 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 KLHDC9Q8NEP7 349 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 HM13Q8TCT9 377 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 GRIN3AQ8TCU5 1115 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 GPR152Q8TDT2 470 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 LRRC58Q96CX6 371 aa16.2■□□□□ 0.18
LTBR-201ENST00000228918 DERL2Q9GZP9 239 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms