RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ZRANB3Q5FWF4 1079 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 FAM78AQ5JUQ0 283 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SPDYAQ5MJ70 313 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 DPY19L3Q6ZPD9 716 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 FGF13Q92913 245 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.222e-7■■■■■ 60.5
PHGDH-216ENST00000641375 ZNF395Q9H8N7 513 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 PPIL1Q9Y3C6 166 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SLC30A1Q9Y6M5 507 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 ZNF106Q9H2Y7 1883 aaKnown RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 CHUKO15111 745 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 ITM2AO43736 263 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 NFATC1O95644 943 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 PPARGP37231 505 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 VIPR2P41587 438 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 SCTRP47872 440 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 VASPP50552 380 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 C11orf91Q3C1V1 193 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 TMEM215Q68D42 235 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 PSAPL1Q6NUJ1 521 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 STK40Q8N2I9 435 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 SPATA6LQ8N4H0 392 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 WFIKKN2Q8TEU8 576 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 EID2BQ96D98 161 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
PHGDH-216ENST00000641375 CCDC126Q96EE4 140 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 TAS2R13Q9NYV9 303 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 APPL1Q9UKG1 709 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 SCN8AQ9UQD0 1980 aa16.39■□□□□ 0.21
PHGDH-216ENST00000641375 WASH3PC4AMC7 463 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SRP72O76094 671 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 FSBPO95073 299 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 ASLP04424 464 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 ATP5BP06576 529 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 PRSS56P0CW18 603 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 ADARP55265 1226 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 XIAPP98170 497 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 ACTN3Q08043 901 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 GEN1Q17RS7 908 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 CERS6Q6ZMG9 384 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 Q6ZVU0 165 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 USP45Q70EL2 814 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 ERP27Q96DN0 273 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SCRN2Q96FV2 425 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 WWP1Q9H0M0 922 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 IGFLR1Q9H665 355 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SYTL2Q9HCH5 934 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 COMMD10Q9Y6G5 202 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 PRRC2BQ5JSZ5 2229 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 LYPLA1O75608 230 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 KITP10721 976 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 PTGER3P43115 390 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 POLR2LP62875 67 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 BNIP1Q12981 228 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 CDKN3Q16667 212 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SPRED3Q2MJR0 410 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 TECRLQ5HYJ1 363 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 TRIM68Q6AZZ1 485 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 TMEM184AQ6ZMB5 413 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 TPRG1Q6ZUI0 275 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 PIANPQ8IYJ0 282 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 VOPP1Q96AW1 172 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SORT1Q99523 831 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 TTC1Q99614 292 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 MYLK2Q9H1R3 596 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 STN1Q9H668 368 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 MARCOQ9UEW3 520 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 DNAJC16Q9Y2G8 782 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 FNDC3AQ9Y2H6 1198 aaKnown RBP16.38■□□□□ 0.21
PHGDH-216ENST00000641375 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
PHGDH-216ENST00000641375 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 HGSO14964 777 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 CLDN7O95471 211 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 HSPA4LO95757 839 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 PYGLP06737 847 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 SRPRAP08240 638 aaKnown RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 ZNF37AP17032 561 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 CD9P21926 228 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 ATP5F1P24539 256 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 FMO4P31512 558 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 PTPN5P54829 565 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 PREPLQ4J6C6 727 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 TAS2R42Q7RTR8 314 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 PIM3Q86V86 326 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 CBARPQ8N350 705 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 OR2A12Q8NGT7 310 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 ANKRD49Q8WVL7 239 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 GATA5Q9BWX5 397 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 TRPV4Q9HBA0 871 aa16.37■□□□□ 0.21
PHGDH-216ENST00000641375 THG1LQ9NWX6 298 aaKnown RBP16.37■□□□□ 0.21
PHGDH-216ENST00000641375 HEY2Q9UBP5 337 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms