RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 RAB17Q9H0T7 212 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 PABPC3Q9H361 631 aaKnown RBP6.17□□□□□ -1.42
ATM-229ENST00000639953 CENPHQ9H3R5 247 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 EPHX3Q9H6B9 360 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 MRPL47Q9HD33 250 aaKnown RBP6.17□□□□□ -1.42
ATM-229ENST00000639953 EURLQ9NYK6 297 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 ANAPC5Q9UJX4 755 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 FBXO10Q9UK96 956 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 CDH7Q9ULB5 785 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 DRG1Q9Y295 367 aaKnown RBP6.17□□□□□ -1.42
ATM-229ENST00000639953 SCINQ9Y6U3 715 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 COL4A3Q01955 1670 aa6.17□□□□□ -1.42
ATM-229ENST00000639953 NUP210Q8TEM1 1887 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 A0A0G2JNJ9 132 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM221BA6H8Z2 402 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM72CH0Y354 149 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 GOLGA8MH3BSY2 632 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 DNALI1O14645 258 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 ZNF197O14709 1029 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 EIF3HO15372 352 aaKnown RBP eCLIP6.16□□□□□ -1.424e-7■□□□□ 8.7
ATM-229ENST00000639953 ACSL3O95573 720 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 CSH1P0DML2 217 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 CSH2P0DML3 217 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 LAMP2P13473 410 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 RARGP13631 454 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 PDGFRAP16234 1089 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 NR1D1P20393 614 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 DRD4P21917 467 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 HPDP32754 393 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 MDH1P40925 334 aaKnown RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 VIPR2P41587 438 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 MAGEA11P43364 429 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 MAP3K7CLP57077 242 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 RPL10AP62906 217 aaKnown RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 ACAP1Q15027 740 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 PPP1R7Q15435 360 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 TAF12Q16514 161 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 P3H1Q32P28 736 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 KRT71Q3SY84 523 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 GPR158Q5T848 1215 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 RNASEH2BQ5TBB1 312 aaKnown RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 FAXCQ5TGI0 409 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM72AQ5TYM5 149 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 TXNDC8Q6A555 127 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 TANGO2Q6ICL3 276 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM72DQ6L9T8 149 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 BNIPLQ7Z465 357 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 PIGZQ86VD9 579 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM72BQ86X60 149 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 RFX6Q8HWS3 928 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 DEFB106AQ8N104 65 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 PLD5Q8N7P1 536 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 SCAMP5Q8TAC9 235 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 FAM172AQ8WUF8 416 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 PRCCQ92733 491 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 FUBP3Q96I24 572 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATM-229ENST00000639953 PLEKHG4BQ96PX9 1271 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 NAP1L3Q99457 506 aaPredicted RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 TMEM109Q9BVC6 243 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 CAPS2Q9BXY5 557 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 EPS15L1Q9UBC2 864 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 Q9UFV3 132 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 NDOR1Q9UHB4 597 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 ASIC3Q9UHC3 531 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 USP18Q9UMW8 372 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 ASB3Q9Y575 518 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.16□□□□□ -1.42
ATM-229ENST00000639953 NUMBLQ9Y6R0 609 aa6.16□□□□□ -1.42
ATM-229ENST00000639953 KIF26AQ9ULI4 1882 aaPredicted RBP6.15□□□□□ -1.42
ATM-229ENST00000639953 HELZP42694 1942 aaKnown RBP6.15□□□□□ -1.42
ATM-229ENST00000639953 GOLGA6L10A0A0M3HER8 536 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 A0A1W2PPM1 405 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 C2orf78A6NCI8 922 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 ANHXE9PGG2 379 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 F5H423 210 aaPredicted RBP6.15□□□□□ -1.42
ATM-229ENST00000639953 MED7O43513 233 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 AVILO75366 819 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 RASGRP1O95267 797 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 PRAMEF12O95522 483 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 F7P08709 466 aaPredicted RBP6.15□□□□□ -1.42
ATM-229ENST00000639953 FAM200BP0CF97 657 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 NAT1P18440 290 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 FCARP24071 287 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 FOXN2P32314 431 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 LSP1P33241 339 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.42
ATM-229ENST00000639953 GRIA1P42261 906 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 MAGEA4P43358 317 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 CCT5P48643 541 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 SLC5A3P53794 718 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 GBE1Q04446 702 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 GPS1Q13098 491 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 OLIG2Q13516 323 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 HTR4Q13639 388 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 ZSCAN26Q16670 478 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 HSP90B2PQ58FF3 399 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 TFDP3Q5H9I0 405 aa6.15□□□□□ -1.42
ATM-229ENST00000639953 FAM78AQ5JUQ0 283 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms