RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 BLOC1S3Q6QNY0 202 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 PTGR2Q8N8N7 351 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 PAPD5Q8NDF8 572 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 ACDQ96AP0 544 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 CNDP2Q96KP4 475 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 TUBA1CQ9BQE3 449 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 YTHDF1Q9BYJ9 559 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 ARNT2Q9HBZ2 717 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 ATP13A1Q9HD20 1204 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 MID1IP1Q9NPA3 183 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 COQ6Q9Y2Z9 468 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 PCDHGA4Q9Y5G9 962 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 PTCH2Q9Y6C5 1203 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 TRIP12Q14669 1992 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 IGLV3-25P01717 112 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 SMPD1P17405 629 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 BDNFP23560 247 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 CYP2C18P33260 490 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 POLR2IP36954 125 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 CCR3P51677 355 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 MOGQ16653 247 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 MANEALQ5VSG8 457 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 OGFOD2Q6N063 350 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 PTRH1Q86Y79 214 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 DDHD1Q8NEL9 900 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 OR52K2Q8NGK3 314 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 GABPB2Q8TAK5 448 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 MAGEE2Q8TD90 523 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 PPP1R10Q96QC0 940 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 KCNA7Q96RP8 456 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 TRIM54Q9BYV2 358 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 MUC13Q9H3R2 512 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 INTS10Q9NVR2 710 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 ZNF639Q9UID6 485 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 KCNH4Q9UQ05 1017 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 ADM5C9JUS6 153 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 CCL22O00626 93 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 CD1DP15813 335 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 NCK1P16333 377 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 SERPINH1P50454 418 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 PHEXP78562 749 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 RELAQ04206 551 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 NFATC3Q12968 1075 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 EIF4EBP2Q13542 120 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 RABL3Q5HYI8 236 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 DCP1BQ8IZD4 617 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 OR13F1Q8NGS4 319 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 SMARCD1Q96GM5 515 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 ZFP42Q96MM3 310 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 CYP2S1Q96SQ9 504 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 ALG2Q9H553 416 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 MARCH4Q9P2E8 410 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 IFT80Q9P2H3 777 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 POLG2Q9UHN1 485 aa19.54■□□□□ 0.72
PDLIM3-212ENST00000620787 SMIM35A0A1B0GVV1 85 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 FUOMA2VDF0 154 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 ASPDHA6ND91 283 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 FGF10O15520 208 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 SNAI1O95863 264 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 LBPP18428 481 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 IREB2P48200 963 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 LHX1P48742 406 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 BMXP51813 675 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 SPIDRQ14159 915 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 PLCL1Q15111 1095 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 CCNYL2Q5T2Q4 361 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 TIGD7Q6NT04 549 aaPredicted RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 IFNEQ86WN2 208 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 CENPSQ8N2Z9 138 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 NSUN5Q96P11 429 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 ASB2Q96Q27 587 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 SLC30A3Q99726 388 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 PKD2L2Q9NZM6 624 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 ANAPC2Q9UJX6 822 aa19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 OAS3Q9Y6K5 1087 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-212ENST00000620787 FUCA1P04066 466 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 OCM2P0CE71 109 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 OCMP0CE72 109 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 SMIM10L2AP0DMW4 78 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 SMIM10L2BP0DMW5 78 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 HGFP14210 728 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 MATN1P21941 496 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 ARSDP51689 593 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 GEN1Q17RS7 908 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 AFMIDQ63HM1 303 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 TBPL2Q6SJ96 375 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 TBC1D21Q8IYX1 336 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 DNAJB3Q8WWF6 145 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 TUBGCP3Q96CW5 907 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 MFSD1Q9H3U5 465 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 CATSPERBQ9H7T0 1116 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 OR51F1A6NGY5 319 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 SLC7A4O43246 635 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 PAGE1O75459 146 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 PAPSS2O95340 614 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 LINC00032P0C843 101 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 ZNF182P17025 639 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 MAGEA10P43363 369 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms