RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 FSCN3Q9NQT6 498 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 NFKBIL1Q9UBC1 381 aaPredicted RBP13.22□□□□□ -0.29
MDC1-209ENST00000613547 OR1A2Q9Y585 309 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 NDC80O14777 642 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 AURKAO14965 403 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 HOXC4P09017 264 aaPredicted RBP13.21□□□□□ -0.29
MDC1-209ENST00000613547 MYCLP1P12525 358 aaPredicted RBP13.21□□□□□ -0.29
MDC1-209ENST00000613547 TPH1P17752 444 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 TRIM23P36406 574 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 SPAM1P38567 509 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 HADHAP40939 763 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 PTGIRP43119 386 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 TERF1P54274 439 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 KIAA1024LP59773 190 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 BNC1Q01954 994 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 POU6F1Q14863 301 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 NFATC4Q14934 902 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ZNF423Q2M1K9 1284 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ALS2CLQ60I27 953 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 PDPK2PQ6A1A2 396 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ADAMTSL4Q6UY14 1074 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 MACC1Q6ZN28 852 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ZNF572Q7Z3I7 529 aaPredicted RBP13.21□□□□□ -0.29
MDC1-209ENST00000613547 PCGF5Q86SE9 256 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 HEATR4Q86WZ0 1026 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 SPATS2Q86XZ4 545 aaKnown RBP13.21□□□□□ -0.29
MDC1-209ENST00000613547 PLA2G15Q8NCC3 412 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 GPR26Q8NDV2 337 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 C19orf43Q9BQ61 176 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 CASS4Q9NQ75 786 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 GPR27Q9NS67 375 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 IL17CQ9P0M4 197 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 NEU2Q9Y3R4 380 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ARL5AQ9Y689 179 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 GON4LQ3T8J9 2241 aa13.21□□□□□ -0.29
MDC1-209ENST00000613547 ANKRD36A6QL64 1941 aa13.21□□□□□ -0.3
MDC1-209ENST00000613547 FAM186AA6NE01 2351 aa13.21□□□□□ -0.3
MDC1-209ENST00000613547 TNRC6BQ9UPQ9 1833 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 GLYATL1P3A0A0U1RQE8 302 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 HEATR9A2RTY3 570 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 H3BM21 787 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 K7ESM1 405 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 BPIP17213 487 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 MAGEA6P43360 314 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 NPY2RP49146 381 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 CCT8P50990 548 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 BLKP51451 505 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 SUZ12Q15022 739 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 HENMT1Q5T8I9 393 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 RFLNAQ6ZTI6 216 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 NLRP9Q7RTR0 991 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 PPIL6Q8IXY8 311 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 NETO1Q8TDF5 533 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 CPT1BQ92523 772 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 FUBP1Q96AE4 644 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 EID2BQ96D98 161 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 WDR92Q96MX6 357 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 IL22Q9GZX6 179 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 XAB2Q9HCS7 855 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 PIH1D1Q9NWS0 290 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 BFARQ9NZS9 450 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 FNDC3AQ9Y2H6 1198 aaKnown RBP13.2□□□□□ -0.3
MDC1-209ENST00000613547 MRFAP1Q9Y605 127 aa13.2□□□□□ -0.3
MDC1-209ENST00000613547 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 A0A1B0GTQ1 180 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 SMAPO00193 183 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 TTI1O43156 1089 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 ZNF883P0CG24 379 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 MLNP12872 115 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 SDHBP21912 280 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 ADRA1DP25100 572 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 GRIA1P42261 906 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 LIMK1P53667 647 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
MDC1-209ENST00000613547 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
MDC1-209ENST00000613547 CDK3Q00526 305 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 PPARDQ03181 441 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 ITGA9Q13797 1035 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 FZD2Q14332 565 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 CERCAMQ5T4B2 595 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 LRRC8BQ6P9F7 803 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms