RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CCDC91Q7Z6B0 441 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 STK40Q8N2I9 435 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 ARMC2Q8NEN0 867 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM45AQ8TCE6 357 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM161BQ96MY7 647 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 CRYL1Q9Y2S2 319 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 STARD13Q9Y3M8 1113 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 TNRC18O15417 2968 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 A0A087X1B8 175 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 A8MX80 341 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 UPK3BL1B0FP48 263 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 UPK3BL2E5RIL1 263 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 SLC35E2BP0CK96 405 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 PRSS56P0CW18 603 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 HLA-EP13747 358 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 BPIP17213 487 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 DRD4P21917 467 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 TNFRSF4P43489 277 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 PTSQ03393 145 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 ELAVL3Q14576 367 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 CCDC153Q494R4 210 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 ZDHHC20Q5W0Z9 365 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 LRRC66Q68CR7 880 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 CPLX4Q7Z7G2 160 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 CEP97Q8IW35 865 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 LRRC34Q8IZ02 419 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 PNPLA1Q8N8W4 532 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 LRRC8CQ8TDW0 803 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 TSNARE1Q96NA8 513 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 NDNQ99608 321 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 RABEP2Q9H5N1 569 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 B4GALT6Q9UBX8 382 aa17.6■□□□□ 0.41
SHKBP1-224ENST00000600718 C16orf96A6NNT2 1141 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 BIRC5O15392 142 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PHGDHO43175 533 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PLIN3O60664 434 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 SRP72O76094 671 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TOP3BO95985 862 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 HNRNPLP14866 589 aaKnown RBP eCLIP17.59■□□□□ 0.411e-11■■■■□ 20.2
SHKBP1-224ENST00000600718 ZNF30P17039 623 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 XPAP23025 273 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 VIPR1P32241 457 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PPARGP37231 505 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 SPAM1P38567 509 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 CDKN1CP49918 316 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 GALK1P51570 392 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 MLLT1Q03111 559 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 SMAD4Q13485 552 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 AAK1Q2M2I8 961 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PSAPL1Q6NUJ1 521 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 C16orf46Q6P387 395 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 CERS6Q6ZMG9 384 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TTC7BQ86TV6 843 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PIANPQ8IYJ0 282 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF75CPQ92670 426 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 P2RY13Q9BPV8 354 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM96AQ9H5X1 160 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 IL26Q9NPH9 171 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TRPV5Q9NQA5 729 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TMEM216Q9P0N5 145 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 EMCNQ9ULC0 261 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PPM1HQ9ULR3 514 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 WDR91A4D1P6 747 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 SOX1O00570 391 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 NPC1O15118 1278 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 LHCGRP22888 699 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 IL12RB1P42701 662 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 IRF9Q00978 393 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 ARHGEF7Q14155 803 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 DBN1Q16643 649 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 ZNF549Q6P9A3 640 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TAS2R42Q7RTR8 314 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 SNX20Q7Z614 316 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TRIM42Q8IWZ5 723 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PLD6Q8N2A8 252 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 LPGAT1Q92604 370 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 PBXIP1Q96AQ6 731 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 FAM129BQ96TA1 746 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 TTC1Q99614 292 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 OLFM1Q99784 485 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 AARSD1Q9BTE6 412 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 C1QTNF1Q9BXJ1 281 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 NSRP1Q9H0G5 558 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 HCN2Q9UL51 889 aa17.59■□□□□ 0.41
SHKBP1-224ENST00000600718 CDH23Q9H251 3354 aa17.58■□□□□ 0.41
SHKBP1-224ENST00000600718 MBTPS2O43462 519 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 PROCP04070 461 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 CHRM1P11229 460 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 NEFHP12036 1026 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 ITGALP20701 1170 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 KCNA5P22460 613 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 PTGER3P43115 390 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 SOX9P48436 509 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 SEMG2Q02383 582 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 LYPLAL1Q5VWZ2 237 aa17.58■□□□□ 0.4
SHKBP1-224ENST00000600718 FAM151BQ6UXP7 276 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms