RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 FAM153CQ494X1 144 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 PRR23CQ6ZRP0 262 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 PDIK1LQ8N165 341 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 DNAAF3Q8N9W5 541 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 CENPTQ96BT3 561 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 RMDN1Q96DB5 314 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 BMFQ96LC9 184 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 ADGRE3Q9BY15 652 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 CAAP1Q9H8G2 361 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 MBNL1Q9NR56 388 aaKnown RBP14.99□□□□□ -0.01
TRIM28-207ENST00000597136 PIH1D1Q9NWS0 290 aaKnown RBP14.99□□□□□ -0.01
TRIM28-207ENST00000597136 SLC6A14Q9UN76 642 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 DCHS1Q96JQ0 3298 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 UQCRHLA0A096LP55 91 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 LNP1A1A4G5 178 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PRAMEF26H0Y7S4 382 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 AP3B1O00203 1094 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CLDN7O95471 211 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 UQCRHP07919 91 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CD38P28907 300 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 HOXD12P35452 270 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 RPL26P61254 145 aaKnown RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 RACK1P63244 317 aaKnown RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PTSQ03393 145 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CBLBQ13191 982 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CDKN3Q16667 212 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 MSS51Q4VC12 460 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PRAMEF14Q5SWL7 426 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 GCNT7Q6ZNI0 430 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 HSD11B1LQ7Z5J1 315 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PELI3Q8N2H9 469 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 TMEM145Q8NBT3 493 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CEP76Q8TAP6 659 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 SUSD2Q9UGT4 822 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 RPL26L1Q9UNX3 145 aaKnown RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 DMTF1Q9Y222 760 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 LZTS3O60299 673 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 RECQL5O94762 991 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 FGF1P05230 155 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 ELFN1P0C7U0 828 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CYP2A6P11509 494 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 TPH1P17752 444 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 ENGP17813 658 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 HNRNPA2B1P22626 353 aaKnown RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 DPP6P42658 865 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 AFF3P51826 1226 aaKnown RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 SESN2P58004 480 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 ACOX1Q15067 660 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 KIF19Q2TAC6 998 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 WSCD2Q2TBF2 565 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 USP45Q70EL2 814 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CCDC25Q86WR0 208 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 TP53I13Q8NBR0 393 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PLA2G15Q8NCC3 412 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 ASB12Q8WXK4 309 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 EID2BQ96D98 161 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 COQ10AQ96MF6 247 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 PHACTR1Q9C0D0 580 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 SPO11Q9Y5K1 396 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 SNX11Q9Y5W9 270 aa14.98□□□□□ -0.01
TRIM28-207ENST00000597136 CAPN8A6NHC0 703 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 E7ESA3 106 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 BANF1O75531 89 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 IGFALSP35858 605 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 GRIA4P48058 902 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 NPY2RP49146 381 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 MSLNQ13421 630 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 STAT4Q14765 748 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 BBS9Q3SYG4 887 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 DNAJC21Q5F1R6 531 aaKnown RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 CERCAMQ5T4B2 595 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 LRRC66Q68CR7 880 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 Q6ZVL8 140 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 CENPUQ71F23 418 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 SPATS2Q86XZ4 545 aaKnown RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 AGGF1Q8N302 714 aaeCLIP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 AENQ8WTP8 325 aaKnown RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 FUBP1Q96AE4 644 aaKnown RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 SIGLEC10Q96LC7 697 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 LENG8Q96PV6 779 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 NUSAP1Q9BXS6 441 aaKnown RBP14.97□□□□□ -0.01
TRIM28-207ENST00000597136 BFARQ9NZS9 450 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 ANKRD6Q9Y2G4 727 aa14.97□□□□□ -0.01
TRIM28-207ENST00000597136 ASXL3Q9C0F0 2248 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 SDR42E2A6NKP2 422 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 PRR5-ARHGAP8B1AHC4 643 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 ARHGAP33O14559 1287 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 CDX4O14627 284 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-207ENST00000597136 AURKAO14965 403 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 VILLO15195 856 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 EIF3HO15372 352 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRIM28-207ENST00000597136 C1SP09871 688 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 MGAT1P26572 445 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 AKT2P31751 481 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 NUDT1P36639 197 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 ETV3P41162 512 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 CRADDP78560 199 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 DHX9Q08211 1270 aaKnown RBP14.96□□□□□ -0.01
TRIM28-207ENST00000597136 GRIK2Q13002 908 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms