RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 GOLGA6L6A8MZA4 724 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 PDE2AO00408 941 aaPredicted RBP15.07■□□□□ 0
TRIM28-205ENST00000595028 TNFP01375 233 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 GOLGA6DP0CG33 693 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 CTSEP14091 401 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 JUPP14923 745 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 CTNNA2P26232 953 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 CDK3Q00526 305 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 PTSQ03393 145 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 NR0B2Q15466 257 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 TCEA2Q15560 299 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 CDKN3Q16667 212 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 TEX44Q53QW1 395 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 RFLNAQ6ZTI6 216 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 BBS12Q6ZW61 710 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 ZNF765Q7L2R6 523 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 NT5DC3Q86UY8 548 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 SLC35F3Q8IY50 421 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 SDR16C5Q8N3Y7 309 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 IFI44Q8TCB0 444 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 TADA1Q96BN2 335 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 AP2M1Q96CW1 435 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 ABCG8Q9H221 673 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 GLOD4Q9HC38 313 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 MRPL40Q9NQ50 206 aaKnown RBP15.07■□□□□ 0
TRIM28-205ENST00000595028 GOLGA6AQ9NYA3 693 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 CD84Q9UIB8 345 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 DOLKQ9UPQ8 538 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 PCDHA3Q9Y5H8 950 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 A0A087WV48 116 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 C1orf232A0A0U1RR37 186 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 PRSS38A1L453 326 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 ANKRD66B4E2M5 251 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 APOC4-APOC2K7ER74 178 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 TK2O00142 265 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 MTSS1O43312 755 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 SOD1P00441 154 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 APOC2P02655 101 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 PTPN7P35236 360 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 RPIAP49247 311 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 COPS2P61201 443 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 WASHC5Q12768 1159 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 GALNT3Q14435 633 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 GUSBP11Q6P575 273 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 LVRNQ6Q4G3 990 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 ADAMTSL4Q6UY14 1074 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 EFL1Q7Z2Z2 1120 aaKnown RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 ZC3H18Q86VM9 953 aaKnown RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 GKN2Q86XP6 184 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 RAVER1Q8IY67 606 aaKnown RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 CACTIN-AS1Q8N1I8 211 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 TXLNBQ8N3L3 684 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 PDCD7Q8N8D1 485 aaKnown RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 ARL10Q8N8L6 244 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 KYQ8NBH2 561 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 KIAA1524Q8TCG1 905 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 GLMNQ92990 594 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 TEKT5Q96M29 485 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 HERPUD2Q9BSE4 406 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 MLPHQ9BV36 600 aaPredicted RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 HEMGNQ9BXL5 484 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 ADGRE3Q9BY15 652 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 FRMD8Q9BZ67 464 aaPredicted RBP15.06■□□□□ 0
TRIM28-205ENST00000595028 CYP4F12Q9HCS2 524 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 CLCA2Q9UQC9 943 aa15.06■□□□□ 0
TRIM28-205ENST00000595028 ZFC3H1O60293 1989 aaKnown RBP15.05■□□□□ 0
TRIM28-205ENST00000595028 MACROD2A1Z1Q3 448 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 CPED1A4D0V7 1026 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 EME2A4GXA9 379 aaPredicted RBP15.05■□□□□ -0
TRIM28-205ENST00000595028 HACD1B0YJ81 288 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 OPA1O60313 960 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 CLDN7O95471 211 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 PYGLP06737 847 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 CD68P34810 354 aaPredicted RBP15.05■□□□□ -0
TRIM28-205ENST00000595028 GPR1P46091 355 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 KIF5AQ12840 1032 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 TARDBPQ13148 414 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM28-205ENST00000595028 NOMO1Q15155 1222 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 NLRP8Q86W28 1048 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 NRSN1Q8IZ57 195 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 DCBLD1Q8N8Z6 715 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 MAPK15Q8TD08 544 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ -0
TRIM28-205ENST00000595028 ALG3Q92685 438 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 NAT6Q93015 286 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 SCAMP4Q969E2 229 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 NXPE2Q96DL1 559 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 KLHL8Q9P2G9 620 aaPredicted RBP15.05■□□□□ -0
TRIM28-205ENST00000595028 TRIM10Q9UDY6 481 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 MOSPD1Q9UJG1 213 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 SLC17A4Q9Y2C5 497 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 EFR3BQ9Y2G0 817 aa15.05■□□□□ -0
TRIM28-205ENST00000595028 A0A0U1RQJ8 604 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 TRABD2BA6NFA1 517 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 MT-CYBP00156 380 aaPredicted RBP15.04■□□□□ -0
TRIM28-205ENST00000595028 CEACAM5P06731 702 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 NFKB1P19838 968 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 RWDD2BP57060 319 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 GSDMDP57764 484 aa15.04■□□□□ -0
TRIM28-205ENST00000595028 CDK18Q07002 472 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms